Thalassiosira pseudonana: THAPSDRAFT_24475
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Entry
THAPSDRAFT_24475 CDS
T01078
Symbol
RPT3
Name
(RefSeq) 26S proteasome ATPase regulatory subunit
KO
K03063
26S proteasome regulatory subunit T3
Organism
tps
Thalassiosira pseudonana
Pathway
tps03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
THAPSDRAFT_24475 (RPT3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
tps03051
]
THAPSDRAFT_24475 (RPT3)
Proteasome [BR:
tps03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
THAPSDRAFT_24475 (RPT3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_5
AAA_2
AAA_16
AAA_lid_3
AAA_22
DUF815
AAA_7
TIP49
nSTAND3
RuvB_N
RNA_helicase
Mg_chelatase
NPHP3_N
Parvo_NS1
AAA_28
AAA_14
ATPase
AAA_18
AAA_30
AAA_24
AAA_17
TsaE
Sigma54_activat
NTPase_1
IstB_IS21
AAA_25
AAA_33
IPT
AAA_3
NACHT
AAA_lid_PRS2_C
AAA_11
Motif
Other DBs
NCBI-GeneID:
7445815
NCBI-ProteinID:
XP_002293010
JGI:
24475
UniProt:
B8CAA1
LinkDB
All DBs
Position
12:452429..453812
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AA seq
374 aa
AA seq
DB search
MKSLERQLEFVSLQEEYLKDEMRHLQRELLRAKEEIRRIQSVPLVIGQFNEMIDANYGIV
SSTAGSNYYVRILSTLDREALKPNTSIALHRHSHSVVDILPPESDSTVQLMSEKPDVTYK
DIGGMDVQKQEVREAIELPLIQHHLYTQIGIDPPRGVLLYGPPGTGKTMMAKAVANATSA
TFISMVGSEFVQKYLGEGPRMVRDVFRLARENSPCVIFIDEIDAIATKRFDAQTGADREV
QRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPQPDRRQKRMVF
QAATSKMNLSDELDLEDYVNRSEKVSCADVASICAEAGLQAVRENRYVVLPKDFDKAYKR
AVSNREKELLFYSI
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgaaatccctcgaacgccaactagaattcgtatccctccaagaagaatacctcaaagac
gaaatgcgccacctccaacgtgaactcctccgcgccaaggaagaaatccgccgtatccag
agtgttcccctcgtcatcggccaattcaacgaaatgattgatgccaattatggaatagtg
agcagcaccgccggttcgaactactacgtccgaatattgtcaacgttggacagagaggcg
ctcaaaccgaacacgagcattgcgctccatcgtcattcgcattcggtggtggacattttg
ccccccgagagtgatagtacggtgcagttgatgagcgagaagccggatgtgacgtacaag
gacattggtgggatggatgtgcagaagcaggaggttagggaggctattgagttgccgctg
attcagcatcatttgtatacgcagattgggattgatccgcctaggggagttttgttgtat
gggcctcctggaacgggcaaaaccatgatggcaaaagcagtagccaatgccacctcagcc
accttcatctccatggtgggctccgaattcgtccaaaaatacctaggcgaaggacctcgc
atggtacgagatgtctttcgcctcgcccgcgaaaactccccctgcgtcatattcattgac
gaaattgacgccattgccaccaaacgatttgatgcccaaaccggtgccgatagggaagtt
cagcgtattttactcgagttgttgaatcaaatggatgggtttgatcagactaccaatgtc
aaggtgatcatggcgacgaatagggcggacactttggatccggcacttttgaggccagga
cgactggatagaaagattgaatttccccaaccagaccgcaggcaaaagaggatggtgttc
caagctgccacgtcaaagatgaatttgagtgatgagttggatttggaggattatgtgaat
aggagtgagaaggttagttgtgcggatgtggcgtcgatttgtgcagaggcggggttgcag
gctgtgagagagaataggtatgtggtgttgccgaaggattttgataaggcttacaagagg
gctgtgagcaatagggagaaggagcttttgttttacagcatctaa
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