KEGG   Thalassiosira pseudonana: THAPSDRAFT_2467
Entry
THAPSDRAFT_2467   CDS       T01078                                 
Name
(RefSeq) predicted protein
  KO
K08489  syntaxin 16
Organism
tps  Thalassiosira pseudonana
Pathway
tps04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:tps00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    THAPSDRAFT_2467
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tps04131]
    THAPSDRAFT_2467
Membrane trafficking [BR:tps04131]
 SNARE
  Syntaxin (Qa)
   Stx-TGN / EE
    THAPSDRAFT_2467
SSDB
Motif
Pfam: SNARE Bap31_Bap29_C PhaP_Bmeg DUF16
Other DBs
NCBI-GeneID: 7444643
NCBI-ProteinID: XP_002287838
JGI: 2467
UniProt: B8BUF8
LinkDB
Position
2:complement(1072422..1073874)
AA seq 395 aa
MASRDLTSAFLDRRSATNRRRRAGVSSIGGGSKRWRERLLCVWSGGCWDISQAVTPFDDA
SCVNERLRSFDIVTLEQLKQRVIHQTVLPLSPSHHCHCFYPLLLPGISKKKHDITDDHLL
MEDGYTTTLPPDWVNDVDTVNATIVDIQSLMSELASMHASRIGTVFGRDLDNMEKQIERK
TREVTGKLNATFKKWERQLVGRGEKKPQLEQMSNAAYVTSQPTLTISTNQSLSSLAMQLQ
ELSSDFRQKQRKYLGDVKAQKSGGLVESEERFGINLEDDGTLQNEFNFSTTQQLSVVDDL
QAEIQSRDKEISQIAKSIEELGSIFKELAVLVIDQGTILDRIDYNMEAVVEHTKEGIQQL
EKAEKSQKSARPMKCIVCLLCTIMVLLLILVLKHR
NT seq 1188 nt   +upstreamnt  +downstreamnt
atggcatcgagagacttgacctctgccttccttgatcggcgtagtgcgacaaatcgccgc
cgccgggcgggagttagctctatcggtggaggatccaagaggtggagagagaggctgctc
tgtgtctggtcggggggatgctgggatatctctcaggcagtgacgccgtttgacgatgcc
tcatgtgtcaacgagagattgaggagctttgacatcgtcacgctcgagcagctgaagcag
cgcgttattcaccaaacggtattgccgctatcgccatctcaccattgccattgcttctac
cctcttctactgccaggcatctctaaaaagaaacacgatattacagatgatcatcttttg
atggaggatggatatacaacgaccctccctcctgattgggtcaatgatgtcgatacagtc
aatgcaacaatcgttgatattcaaagtctcatgtcggagttagcatcaatgcatgcctcg
aggattggtacggtgtttgggagagaccttgacaacatggaaaaacaaatagagagaaag
acgagggaagtcactggaaagctgaacgctaccttcaaaaagtgggagcgtcaactcgtc
gggcggggggagaagaagccacagttggagcaaatgtccaacgcagcatatgtaacgtct
caacctacacttactatttctacaaaccaatctctctccagtttggcaatgcaactgcaa
gaactatcctcggatttccgtcaaaaacaaagaaagtacttgggagacgtcaaagcacaa
aagtcaggaggtcttgtggaaagcgaggagcgtttcggtatcaatctcgaggacgatggc
actcttcaaaacgagttcaacttttccaccacacaacaactgtctgtcgttgatgacttg
caagcagaaatccaatcacgcgacaaggagatctctcagattgcaaagagcatcgaggaa
ttgggatccatcttcaaagagttggcagtattggtcattgatcagggaacgattctcgat
aggattgattacaatatggaggcggtagtagagcataccaaggagggaattcagcagttg
gaaaaggcagagaagagccaaaagagcgcaagacctatgaagtgtatcgtttgtcttctt
tgtacaatcatggtattgttgttgattctagtcttgaagcatcgttga

DBGET integrated database retrieval system