Thalassiosira pseudonana: THAPSDRAFT_24683 Help Entry THAPSDRAFT_24683  CDS       T01078                                  Name (RefSeq) predicted protein   KO K07204   regulatory associated protein of mTOR Organism tps  Thalassiosira pseudonana Pathway tps04136   Autophagy - other Brite KEGG Orthology (KO) [BR:tps00001]  09140 Cellular Processes   09141 Transport and catabolism    04136 Autophagy - other     THAPSDRAFT_24683  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:tps04131]     THAPSDRAFT_24683 Membrane trafficking [BR:tps04131]  Autophagy   Other autophagy associated proteins    mTORC1 complex     THAPSDRAFT_24683 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Raptor_N WD40_Prp19 WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_EML_2 WD40 Beta-prop_EML Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_IFT140_1st Beta-prop_DCAF4 HEAT_EZ PEP5_VPS11_N Motif Other DBs NCBI-GeneID:  7446957 NCBI-ProteinID:  XP_002293599 JGI:  24683 UniProt:  B8CBK6 LinkDB All DBs Position 13:complement(648706..654129) Genome browser AA seq 1752 aa AA seqDB search MNPNYKNGPDAIYDTDDTTTTTPYDENKEYYPRLKRAPYLFDVVSSDFGIRQTRFAHLGS VGEGEMWDASLKDEGDGGTLRNTGGSTLNPRTPTKSNSSTNLSTPQPMKRRSSLARVFST LGMSPGSTISEGAMTPSAGWDGGGGGGDSETNPNTLIPPRFRRGSSAEVNTVRAGSIDLG GGGTSTRDRLGSRGNMNISKIPRWALHDPCAIVMKDGVPVLMGTLVHHHLLLSQSQSPFV SPHFVVTPTWRLKERMKTVGICLILALNVGTDPPDLNKPNPCAKLQCWLDPTSISRAKAK ERIGERLEQQYAKWQQRSKLKYRRAIDPTVEIVKDLCFRMRESAKGERVLLHYNGHGVPR PTVNGEIWLFDKHHTNYIPLSVTDLRRWIGKPSIVVLDCSGAGVLMPFFTAPLSDGGDFL QRSTSNTMDSSDPSEGGQEYSYLRAIRDTIVLCPTSQGEWLPLNPEFPADIFTSCLTTPI PIALRWFVYQNPLSMEFIDLETIADAIPGKLTDRKTPLGELNWIFTAVTDTIAWNVLPSA LFQRLFRQDLLVASMFRNFLLADRILRSLGCSPMSNPELPSTCNHPLWQAWDLAVETCLH QLIDHGYLTRKGSVTAATTKAGTPADDGEGLEKSNSIESEKPTGGGGHSPLPAVANVSYT VDAPFFAEQLTAFEIWLEYASAKPKSKLLIRCPPSAIGGTPLPFLHGSMGGDGASTASPY ELDPPQELPIVLQVLLSQAHRVRALVLLKRFLDLGPSAVNLALSVGIFPYVLKLLQSPID EYKHVLVGIWAQVLAFDESCQVDVVKDGALPHFIRHLRWGLTPSPTNKNLSARQNAVPPS SACFEDAVEQRTMAAFILSVICLGYTLGQSECINAKLHLAIGTLLQSLESQDDDERMKSE DDLSPQFRMWLCICLGNLMKDNVAAEAELYACGLQFRLFARLEDYSPEVRTASCYALSCL VGSAPEKPTVDDSQPITSMMHRNQQYQAQQILMQPFNQGTMSMPGMNVNLNPSAMMTSNM VPPPYGLHPPDFQTQMGSNINPTAKPSFLAPVSDQPIMLAPMQPAQSYQQSEVSTVFEDK QRMDNDLTVASKLSQVLGDASPVVRFEAVLALTRFVGKYLAAFVSAVGNDVVSPPQVRSV LGGNIQTIPLPNGVSPDAEMKLSGIWSSLFRLHRSDPHPSIRLIVHSLVSSINERVMTER TKLRQRSSGRRRSMASSLTDDAADAREKIRRNATGINLSSQGGSPPQSLKRSGSIGFTIL QDGSSTPASSRGMHMNQGSLAFDIADPEFFLPESKFYLWKKVEFADSDNSGDTKNTSDAL SDAGAIKKYRETRNRLVQQKGQLLKDSFAVLAQKPPTNSPSPFGDWEKGGGDAASGAEQE LDLKKQALHLQQVSLLKNTTARGTTSLLLFHPYEPALVVCGGHDNVTCWNVEGKAERMLS FSNENPKQTRMTAAAWINETNTSLLLTGSNDGSVRIWDGLFEPNDELSKEKPSLVSSFFA APDISSDKRYSSGLVLEYQQFGGQLVAGGNTKLIRCWDIATEKCRNTFESKSDASLTTLT TAWNHSYNGYSGLGPDIIVGGYGNGSLRVFDTRCNRGEPAMNIQEGGVANRGLATKRRWK YSEYDEHSSWIVDVSFTTYGGRHELVSGSVAGNIKFWDLRYSSSIRTLEHKMQMTALAAH SNVPMFAVGSPAQFIKLMSHDGATQQVIRYHEKVSGQRIGPVSCLSFHPQMPYLAAGFAD ELVGVYAPRGAF NT seq 5259 nt NT seq  +upstreamnt  +downstreamnt atgaatccaaactacaagaacggcccagacgcaatctacgataccgacgatacaacaaca acgacaccatacgacgaaaacaaagaatactacccccgtctcaaacgagccccctacctc ttcgatgtagtctcatccgactttggcatacgtcaaaccagatttgcccacctcggatcc gtgggagaaggtgagatgtgggatgcttcgctaaaagatgagggtgacggtgggacgttg cgaaacacgggaggttctaccttgaatccgaggacgcctaccaagtctaattcgtcgact aacttgtcaacgccacagccgatgaagaggcgtagttccctcgcgagggtgttttccacg ttgggaatgagtccggggtcgactatatcggaaggagcaatgactcctagtgcgggatgg gatggtggtggagggggtggagattctgaaacgaaccccaacacgctcattcctccgaga tttcgtagggggtcatcggccgaagtcaacacggtacgggcaggctccatcgatttggga ggtggtgggacatccacgcgagatagattgggaagcaggggtaatatgaatatcagcaaa atacctcgttgggcacttcatgatccttgtgcgattgttatgaaggatggtgtaccagta ttaatgggaacacttgtgcatcatcacttgcttctctctcaatctcaatcgcccttcgta tcgcctcatttcgtcgtaactccaacatggcggctgaaagagaggatgaagactgtgggg atctgtctcattcttgccctcaacgttggtaccgatcctccagacttgaacaaaccaaat ccctgcgccaagctgcaatgttggcttgatccaacgtctatatctcgtgccaaagccaaa gaacgtatcggagaacgattggaacaacaatatgctaagtggcagcagaggtcaaagttg aaataccgtcgagcgattgatcctacggttgaaattgtcaaggacttgtgcttcagaatg agagagtctgccaaaggagaacgagtgctactgcattacaacggacacggtgtgccgagg cctaccgtgaatggtgagatttggttattcgacaaacaccacacaaactacatccctctc agtgtcacagatttgcgtaggtggattggaaagccttccatcgtagtattggattgcagt ggtgccggagtattgatgccattcttcactgcccccctgagtgatggtggagatttcttg caacgttcaacttcaaacacaatggacagttcagatccaagcgagggtgggcaggagtat tcataccttcgagctattcgtgataccattgtcttgtgtcctacatctcaaggagaatgg cttcctcttaatccagagtttccggcagatatcttcacttcatgcctgacaacgcccata cccattgctcttcggtggtttgtgtatcagaatcctcttagcatggaattcattgatctt gagactattgctgatgcgattccaggaaagttgactgaccgtaagacgccgttgggagag ttgaattggatattcactgccgtcaccgataccattgcgtggaacgttcttccaagtgct ctattccagcgtctctttcgtcaggatctgttggtggctagcatgttcaggaacttcctt ttggctgacagaattctcagaagcttgggttgcagcccaatgagcaatccagagttgcca agtacatgtaaccatccgttgtggcaagcttgggatttggccgttgagacgtgtttacat cagttgattgatcatggttatttgacaaggaaagggtcggtgactgctgcaacaacaaag gctggaactcccgccgacgatggcgaggggttagagaagtccaactccatcgagagtgaa aagccaacaggaggaggaggtcatagcccacttccggccgtcgccaacgtctcttatacc gttgacgctccgttcttcgcagaacaactcactgcctttgagatttggcttgaatatgca agcgctaaaccaaaaagcaaactcctcatcaggtgtcctcccagcgctattggtggaact cccttgcccttcctccatggttcaatgggaggagatggagcatctacggcatcaccttat gagctggatccaccccaagagttaccaattgtgttgcaggttctcttgtcacaggcacac cgagtaagggcattggtgttgctaaaacggttccttgatttaggtccatcagccgtgaat cttgcactctccgttggtatcttcccttacgtgctcaaactactacaatcaccgattgat gagtacaaacatgtgctagttggcatatgggcacaggtgctagcgtttgatgagagctgc caagttgatgttgtaaaggatggagctttacctcactttattcggcatcttcgttgggga cttactccgtctccaactaataagaacctttctgcacgtcaaaacgcagttcctccatca tcagcttgttttgaggacgcggtggagcaacggaccatggctgcattcattctgtctgtt atttgcttggggtatacgcttggtcaatcagaatgtatcaatgcgaagttacatttggcg attgggacgttgctgcaatcacttgaaagccaggacgatgacgagcgaatgaaatctgaa gatgatttgtcacctcagtttagaatgtggctttgcatatgtttggggaacttgatgaag gacaacgttgcagccgaagctgaattgtatgcgtgtggactgcaattcaggcttttcgca agattagaagattattcgccagaagtgcggactgcttcgtgctatgccctatcttgtctc gttggttcagctcctgaaaagcctaccgttgacgatagccagccaattacatcaatgatg caccgcaatcagcaataccaagcacagcagatattaatgcagccattcaaccaagggacg atgtcaatgcctggcatgaatgtcaacttaaatccatctgcaatgatgacttccaacatg gtaccaccgccgtatgggctccatcctcctgatttccagactcagatgggaagcaacatt aacccaacagcaaaacccagctttttggcaccagtgtcggatcagccaattatgttagca ccaatgcaacctgcccaatcttatcaacagtcagaagtaagcactgtatttgaagacaaa caacggatggataatgacctcacagtagcatccaagttatctcaggttcttggagatgct agtcctgtggttagatttgaagctgtccttgcactgactagattcgttggaaagtatctc gctgctttcgtctcggctgtgggaaacgacgttgtaagtcctcctcaggttcgcagcgtc ttggggggaaatattcaaacaataccactgccgaacggtgttagccctgatgcggagatg aaactctctggtatttggtcgtcgttgtttagactgcacaggagcgatcctcatccgtca attcggttgatagtgcactcattggtgagttctatcaatgaacgtgtaatgacagagaga acaaagttacgccaacgttcaagcggtagacgacgttccatggccagttcgttgacagat gatgcagctgacgcaagagagaaaattagacgcaacgccactgggattaacttgtcttct caaggaggatctcctccgcaatcgttgaagcgatccggctctatcggttttactattttg caggatggcagcagtactcccgcgtccagcagaggtatgcatatgaatcaaggctcgttg gcatttgatattgctgatcccgagttctttcttccagagtcaaagttctacttgtggaag aaggttgagtttgcagatagtgacaacagcggtgacacgaagaatacatcagacgcactt agtgatgctggtgcgataaagaagtaccgagagactagaaatagactcgtacaacagaaa ggccaacttcttaaagattcctttgcggtgttagcgcagaaacccccaacaaactcgcca tctccatttggcgattgggaaaagggtggtggagatgcagcatcaggtgctgaacaggag ttagacttgaagaaacaagcattgcatctccaacaagtctcattgctgaagaatacaact gctcgcggcaccacatctctccttctttttcatccgtatgaacctgcattggtagtatgt ggaggacatgacaatgtaacttgttggaatgtcgaggggaaggctgaacggatgctatcc ttttcaaacgagaaccctaagcaaactcgaatgactgctgcagcatggatcaatgagaca aacacaagtcttttgcttacaggaagcaacgatgggtcggtgcgaatatgggatggtctc ttcgagccgaacgacgaattgagtaaggagaaaccgtctctcgtgtcttccttctttgca gctcctgatatatcctccgacaaacgatatagctctggtcttgtgcttgagtatcagcag tttggaggtcagctcgttgcgggtggaaatactaaactcattcggtgctgggatattgct acggaaaagtgtcggaatacttttgaaagcaagagtgatgcatcgctgacgacactcacc actgcgtggaatcacagttataatggttattctggcctcggacctgacatcattgttggg ggttatggaaacggttcgttacgtgtatttgacacacgatgcaacagaggcgaaccggct atgaacattcaagagggaggtgttgcgaaccgtggccttgcaactaaaagacgttggaag tattctgaatatgacgaacattcgagctggattgtggatgtatccttcacaacgtacggt gggagacatgagttggtatccggcagtgttgcaggcaacataaagttctgggatttacgt tacagcagcagcatcagaactcttgaacacaagatgcaaatgacagcactagcagcacat tcaaatgtacctatgttcgcggttggatctcctgcacagttcatcaaactcatgtctcat gatggcgcaacacagcaggtgatcaggtatcacgaaaaggtttcaggccagcgtataggt ccagtcagctgcttgagttttcacccacagatgccctatcttgccgctggatttgctgat gagcttgtcggtgtctatgctccgagaggggcgttctaa

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