Thalassiosira pseudonana: THAPSDRAFT_24815
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Entry
THAPSDRAFT_24815 CDS
T01078
Name
(RefSeq) predicted protein
KO
K13754
solute carrier family 24 (sodium/potassium/calcium exchanger), member 6
Organism
tps
Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tps02000
]
THAPSDRAFT_24815
Transporters [BR:
tps02000
]
Solute carrier family (SLC)
SLC24: Na+/(Ca2+-K+) exchanger
THAPSDRAFT_24815
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Na_Ca_ex
Motif
Other DBs
NCBI-GeneID:
7451217
NCBI-ProteinID:
XP_002293722
JGI:
24815
UniProt:
B8CC99
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Position
14:346865..349218
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AA seq
597 aa
AA seq
DB search
MFSVKLGLPPRFAGVTLLALGNGAADVSATINAIASDPENGYLMSLGALTGAAMFITTVV
VGAVVVANGGVVCRGALVRDVMALGVTVVVVALNLEKGEVGPGTEKTFISIYIGFVCIVL
VADVYHRAVMLPRLRHEIELREHERQLEAERVASMRAGDALNSFVGDSGAKSVGGEIPDV
VKSGTYDFRNPSMSGGGDDARTHVSAPYRLEDNNPSVIGNRALNAVLTALSNYNEDENMD
ENDMDSTRRNGWGIESTVEGSKSWDRPVVLHGADGILTKHHHHHRQHADGENEDQFHSPY
SVMEDMDVVDRMCLQDGSPGLPAYNWSGAFQDFKHELMVHFRECWRDILDDEESNGLEKF
LLVCEYPMTVLRKLTVSIPCEGSYCRALVALSLGLSPLWFGVYFMTQFSMNLWGIGMIVF
TSIMFVFGLLVVRYAPGGEGTLATILAVPIALYGFIVAATWIDFIADRLVAILGFLGIVL
RIPNSIMGLTVLAWGNSMADLSANVAMARKGLANMAITACFAGPVFNILIGLGAGFGVLR
RVSGTEYNYVHLTPSITTGFVFCFINCGLMLTAGLAINKGIVPATYGYFAVGLKCGN
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgtttagtgtcaaattgggcctcccgcctcggtttgcaggagttacgttgctagctttg
ggaaatggagcagcagatgtatcagccacaatcaatgctattgcatctgatccagaaaat
ggatatctaatgagtttgggagcattgacgggggcagcaatgtttattactacggtggtt
gtgggggcagtggttgtggcgaatggtggagtggtttgtaggggagcgttggtgagggat
gttatggctttgggagtgactgttgtggtggttgctctgaacttggagaagggggaggtt
gggccagggaccgaaaagacgttcatctccatctacattggcttcgtttgtattgtactc
gttgcagatgtgtatcatcgtgctgttatgctcccacgtcttagacacgagatagaactg
cgagagcatgagcgtcaattggaagcagaaagagttgcatcaatgcgagcgggagatgct
ttaaattcatttgttggtgattcgggggcaaagtccgttggtggtgagataccagatgtg
gtaaagagtggcacttatgatttcagaaatccatccatgtctggaggaggagatgatgct
cgaactcacgtcagtgcaccttatcgtctggaggacaacaatccttccgtcatcggcaac
cgggctttgaatgcggtgcttacggctctctcgaactacaacgaggatgaaaacatggat
gagaacgatatggacagcactcgacgcaatggatggggaatagagtctactgtagagggt
agcaaatcttgggatcgcccagtagtgcttcacggtgccgatggcatactaaccaaacat
catcatcaccatcgtcaacatgctgatggagaaaacgaggatcagtttcattctccgtat
agtgtaatggaagacatggatgtggtggatcgtatgtgcttgcaagatggatctcccggg
cttcctgcatacaactggtctggtgcattccaggactttaagcacgagttgatggttcac
tttagagagtgttggagggatatcttggacgacgaggagagtaatggacttgagaagttt
ctgcttgtttgtgaatatccgatgacagtcttgcgaaagctgaccgtgtcgattccttgt
gaaggatcttactgtcgtgctttagttgctctatcgctaggtttatctccgttatggttc
ggtgtctacttcatgactcagttcagcatgaacctttggggtattggaatgattgtcttt
acgtcgatcatgttcgtgttcgggttacttgtagttagatatgctccaggcggagaaggc
acgctggcaaccattctcgcggttccaattgcactttatggctttattgttgcagcaacg
tggatagatttcattgcagatcgtctcgtagccatccttgggtttctgggaattgtatta
cgaattccaaacagtatcatgggtcttactgtactcgcttggggcaatagcatggctgac
ttatcggccaacgtagcaatggctcgcaaaggccttgccaacatggcgattacagcttgc
ttcgctggtcccgtctttaatatccttattggattgggtgctgggtttggcgttcttcga
cgtgtttctggtactgaatacaactatgtacacctgactccttccattaccactggattc
gtcttctgcttcataaactgtggacttatgttgacggcaggtcttgctatcaacaaaggc
attgttccagccacttatggatactttgctgttggacttaagtgtggcaactga
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