KEGG   Thalassiosira pseudonana: THAPSDRAFT_24849
Entry
THAPSDRAFT_24849  CDS       T01078                                 
Name
(RefSeq) predicted protein
  KO
K14570  RNA exonuclease [EC:3.1.-.-]
Organism
tps  Thalassiosira pseudonana
Pathway
tps03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:tps00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    THAPSDRAFT_24849
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tps03009]
    THAPSDRAFT_24849
Ribosome biogenesis [BR:tps03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    THAPSDRAFT_24849
SSDB
Motif
Pfam: RRM_1 zf-CCCH_4 DEDDh_C zf-CCCH
Other DBs
NCBI-GeneID: 7452678
NCBI-ProteinID: XP_002293752
JGI: 24849
UniProt: B8CCE8
LinkDB
Position
14:<490310..492214
AA seq 598 aa
MGKGYKLTSADGDGPKQCAFFFSDKGCRNGAVCKFSHEAAPPGGGAPSTSNNKTSPSVSS
SSVMSSETESDGEIVETRAGAYSSMVAKNDDTNPFFSAVGAVVAPPPPAAVSAVHSAVAS
INNNATEPPTTEKKKKKRKKRSLSAGENPFELATETQAPNNAATAANQKGIVAPPPSVPQ
PKKQKATTTPAKETPQQSTSTPNNNATFRNLQLPIASFSLPISTAATTTPAAASKSPRPP
SPQHEPAHAAPPLPLPVASANHLKWKNAVIATRDHANYDNAFNFERTKQLEFEQGISTPH
HWITTRPYGDWCKNNPASIAIDCEMCETQDPVTGKTDTKALCRLSVINADNPTEVLLDTL
VKSEWPVSNYRTWINGIKAKDLEGVQFTLRHAQMFMNALCSEQTVVVGHAVHNDLLALRM
IHHCNADTAMLYNHSEEEGGTPSLKNLAYGVLKRDMPEVHDSVNDARVALACADHYCSKN
GKVDPVEKVFRRNNGGGRDRDPADTAVLLVHRLPPTSQPGHIADMFLAYTCIKPKNVPEI
TFSGQHGKCHVEFTSKDHAELAYASLNGEEREDKTGKKQKRVGLKNGSYVCVRKMKKT
NT seq 1797 nt   +upstreamnt  +downstreamnt
atgggaaaaggatacaagctgacctccgccgacggcgatggccccaaacaatgcgccttc
ttcttctctgacaagggatgtaggaacggtgctgtctgcaagttctcccacgaagctgct
ccacctggcggcggtgcaccatccacatccaacaacaagacatcacccagcgtgtcgagt
tcctccgtcatgagctctgagaccgagagcgatggagagattgtagaaactcgtgcaggg
gcctattcatccatggttgcaaagaacgatgatacaaacccattcttctctgctgttggt
gccgtcgtggctcctcctccgccggcagccgtgtccgctgtgcattctgcggtagccagc
atcaacaacaacgccactgagccacccactaccgagaaaaagaagaagaaacgcaagaag
cgaagtttgtctgctggtgaaaatccatttgagctcgcaactgagactcaagcccccaac
aacgctgctactgctgcaaaccaaaagggtattgtggctcctcccccctctgtacctcaa
ccaaagaagcaaaaggctacaaccacccctgcgaaagaaacgccacaacagtcgacatca
acccccaataacaacgcaacttttcgcaatcttcaacttcccattgcttctttctctcta
cccatcagtacagcagcaacgacgactcctgcggcagcttccaagtctcctcgtcctcct
tcaccacagcatgaaccggcacacgcagctccaccacttccacttcctgttgcatcggcg
aaccatctcaagtggaagaatgccgtgattgccactcgtgatcacgccaactacgacaat
gcattcaactttgaacgtaccaaacaactggagtttgagcagggaatatctactcctcac
cattggattaccactcgcccttacggagattggtgtaagaacaacccagcttctattgcc
attgattgtgaaatgtgtgagactcaggatccagtgacgggaaagacggataccaaggcg
ttgtgtcgtctatcggtaattaacgccgacaaccctacggaggtattgttggatacgctc
gtgaagtctgagtggccagtctccaactatcgtacgtggatcaatggaatcaaagccaag
gatttggagggagtgcaattcacgttgcgtcatgcgcagatgtttatgaatgcactttgt
tcggagcagacggtggtggttggacacgctgtgcacaatgatttgctggcacttcgcatg
atccatcactgcaatgctgatacggccatgttgtacaatcactcggaagaagaaggcgga
actcccagtttgaagaacttggcgtatggggtattgaaacgagatatgcccgaggttcac
gattctgtgaatgatgctcgtgtggcattggcttgtgcggatcattactgctccaagaat
ggcaaggtggatcctgtggagaaggtgtttaggaggaacaatggaggtgggagggatcgt
gatccagcagacactgcagtattgctcgtgcatcgtctaccgcccacatctcagcccggt
catattgctgacatgttcttggcctacacttgtatcaaacccaagaatgtgcctgaaatc
acattctctggtcagcatggcaagtgtcacgtcgagttcacgtcaaaggaccatgctgaa
cttgcgtatgctagtttgaatggggaggaacgcgaggataagacagggaagaagcagaaa
cgcgttggactgaagaatgggagctacgtttgtgttcgtaagatgaagaagacttga

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