Thalassiosira pseudonana: THAPSDRAFT_24894
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Entry
THAPSDRAFT_24894 CDS
T01078
Name
(RefSeq) predicted protein
Organism
tps
Thalassiosira pseudonana
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EGF_TEN
EGF
EGF_2
EGF_DL_JAG
Motif
Other DBs
NCBI-GeneID:
7452723
NCBI-ProteinID:
XP_002293967
JGI:
24894
UniProt:
B8CCM9
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Position
14:complement(722774..725223)
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AA seq
697 aa
AA seq
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MMPSPRQRATMTSTLLLILPTIIIASSSSSIATICPGGLKCHHGGDCSIGDKDWSSEHNA
NISADLPWIEQLNINGEHCINCHEGWGGVDCNRKYQTCDAEDPDAPTCFNGSSCFKAGIN
AEGKYDYICDCTSATITGEFRYAGEFCQHVEEMKCDDEMFCTNGGQCSSVLDENFNHRHF
ECQCPSDRSGTHCEYLAEEEVPTCSLDCVRGTCAKGFKSYDYLVNTGPFPAQLGTDLISS
NGEHCVCPHGFTGLRCEIAVERCGASKYCYNGSTCVYDNKGNPTCDCNSANSDDKSYAGL
SCEHESTAYCEPGEDQDQKDAYCVNGGTCIEDPDSRHEGCLCPEGWSGDLCEIAGDEEPV
CDLQCENGGSCRLGVKGYKDSFDALGLPVYQTQVENGMHCSCKTGFTGVRCEVDINHCHA
NESGNDEHFCLNGAPCSLDPQLSGVTKKYSCQCDSDKEDEITSMLIGRFCEYKATEFCSE
DGARHNHSFCTNGGKCKHHNGYSDDKHHGCCCEVGYEGEFCQFPVGTLSLKEGESVSWSP
LAECEKKEEPQVILPQAEVEDEIEEEKSSNTNKNGSSEHFASDPLKESMHSQSLTSNETN
GTGNEKSRTAAILASLLAIAAVGGIIGIAYMKRNQTEDSHHFDGDAVWPPMESNNTAPNF
ARTWSYPADHSLSNDNSASKTWEYSNEHGDLHNVQLA
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgatgccatcgcctcgccaacgagcaacaatgacatcaacactcctcctcatcctacca
accatcatcatcgcatcatcctcatcatccatcgccaccatatgccccggaggtttgaaa
tgccaccacggaggagactgtagcatcggcgacaaagactggtcgtccgaacacaatgcc
aacatcagcgccgaccttccttggattgaacaactcaacatcaacggagaacactgcatc
aactgtcacgaagggtggggcggggtcgattgcaacagaaaatatcagacgtgtgatgcc
gaggacccagacgcgcccacgtgcttcaatggctcgtcttgtttcaaggcgggtatcaat
gcggaaggcaaatatgattacatctgtgactgtaccagtgcaacgatcacgggagagttc
agatatgcaggagagttctgtcagcatgtggaggagatgaaatgtgatgatgagatgttt
tgtactaacggtggtcaatgcagtagtgtcttggatgagaacttcaaccatcgtcacttt
gaatgtcaatgtccctccgatcgttcaggaacacactgcgaataccttgccgaagaagaa
gtacccacgtgctcactcgactgtgtccgtggtacttgtgcaaaaggattcaaatcgtac
gactatctcgtcaacactggtcccttccctgctcagttgggcactgatctcatctcttcc
aatggagagcattgcgtatgtccccatgggtttactggattgaggtgtgaaattgccgtt
gagcgatgcggtgcgagcaagtactgttacaatggatcgacatgcgtctatgacaacaag
ggaaaccctacttgcgattgcaacagtgccaactcagatgataaatcgtacgccggattg
agttgtgagcatgagagtacagcatactgtgagcctggtgaggatcaggatcagaaagat
gcgtactgtgtgaacggagggacttgtattgaagatcctgatagtagacatgaaggatgc
ctctgcccagaaggttggagtggagatctttgtgagatcgccggtgatgaagagccagtg
tgtgatttgcaatgtgagaatggagggtcgtgtcgacttggcgtgaaaggatacaaagat
agttttgacgcgttgggtttacccgtttaccaaactcaagttgaaaatggcatgcattgc
agttgcaagacgggttttacgggagtaagatgcgaagtggatatcaatcactgccatgcc
aatgaatctggcaatgacgaacatttttgcttgaatggagcgccatgctcactagaccct
caactcagcggtgtaaccaagaagtatagttgccagtgtgattcagataaggaagatgag
attacatcaatgcttattggacggttttgtgagtacaaagcaactgaattctgttctgaa
gatggcgctagacacaaccactcgttctgtactaatggaggaaagtgcaagcatcacaat
gggtattccgacgacaaacaccacggttgttgttgtgaggtgggctacgagggtgagttc
tgccaatttcccgttggaacattgtcattgaaagaaggagaatcagtaagttggagcccg
cttgctgaatgcgagaaaaaggaagaaccgcaggtaattcttcctcaggccgaggttgaa
gacgagatagaagaagagaaaagttctaataccaataagaatggatcctctgagcatttc
gcttctgatcctttgaaagagtctatgcatagtcaatcattgacttcgaacgaaacgaat
gggactgggaacgaaaagtcaagaacggctgcaatcctcgcttcgctgctcgcaattgcc
gctgtaggaggtattattggcattgcatacatgaagagaaaccaaaccgaagatagtcac
cactttgacggagatgcagtttggcctccaatggagagcaacaatactgctcctaacttt
gcaagaacatggagctaccctgctgatcattcactgtccaatgacaattcagcttcaaaa
acatgggaatattcaaacgaacatggagatcttcataacgtgcaactcgcctag
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