Thalassiosira pseudonana: THAPSDRAFT_24902 Help Entry THAPSDRAFT_24902  CDS       T01078                                  Name (RefSeq) predicted protein   KO K10601   E3 ubiquitin-protein ligase synoviolin [EC:2.3.2.27] Organism tps  Thalassiosira pseudonana Pathway tps04120   Ubiquitin mediated proteolysis tps04141   Protein processing in endoplasmic reticulum Brite KEGG Orthology (KO) [BR:tps00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04141 Protein processing in endoplasmic reticulum     THAPSDRAFT_24902    04120 Ubiquitin mediated proteolysis     THAPSDRAFT_24902  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:tps04121]     THAPSDRAFT_24902 Enzymes [BR:tps01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      THAPSDRAFT_24902 Ubiquitin system [BR:tps04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     THAPSDRAFT_24902 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  zf-RING_2 zf-rbx1 zf-C3HC4 zf-C3HC4_2 zf-HC5HC2H zf-ANAPC11 zf-RING_UBOX zf-RING_11 zf-C3HC4_3 zf-RING_16 PHD_NSD zf-RING_5 FANCL_C zf-RING-like Motif Other DBs NCBI-GeneID:  7452731 NCBI-ProteinID:  XP_002293805 JGI:  24902 UniProt:  B8CCP5 LinkDB All DBs Position 14:767718..770408 Genome browser AA seq 745 aa AA seqDB search MASEDDNNTASAVQQSAASATDAQEAQDVQQRLQEAPGMIKEDNDTHHTPAEPADDGNNE DDDAALAAMMAFQEEQDEGEIQTALDNDDEDEIINDPNIAFLGDDEDDEVNNNDDGQQGE ILHPNANNPAALALRARQALQNQQRAHHQIILQNQSLLRRTIGYFTSMRYTPLSLMAAFV LIHYTLRTRQQFYLTVIYLQSSKLSYIVLGNAIIALAISTFSFVTHLFLDGGLRVNERDA IGEHIRWDVTETCLALTIFRSELDVATAVMFLGLVIMKCLHWSVELRGGHLRMTEEVLVY PDHDDEDDVIHANETNDDATPVTGSNNSTNTQRKKLPWYKRLPHLRLTHIRFYALLQLLL LLDIFAVAHCALSVATDGPSVSILFGFEFAILMVSVLSAMGMYHMHVIDGLMGFLHHVVE GEHHYCPVGGMAEGGPVEEGGETNTEEDADAIEENSGNQNESTDTTSPPTARPKTLAKTL VERIANPWRDRRATLSFAIELMAQAAKFLFYIVFFAIVFTYYGMPINIFREVYVSFQQLR RRLMAFNNYRRLTHNMDKRFESIQDEEELDRLGHTCIICRDQMDLLGGCKKLPGCGHAFH THCLREWLVQQQTCPTCRADIAANEARRKKELERESAAEVLEATSETQETGVEGRDAAAM TTQSDDWSKNVGQAEYGCTKFKSSVFCCNGQRQFPLPLSCRISFGGACLSSSCISQCIWG SSNVCIAISASKNYSSGTGDCVYFY NT seq 2238 nt NT seq  +upstreamnt  +downstreamnt atggcttccgaagacgataacaacactgcttccgcagttcagcagtcagcagcaagtgca actgatgcccaagaggcgcaggatgtgcaacaacgattgcaggaggcaccgggcatgata aaagaagataatgatacacatcacacgccggccgaaccagcagacgacggcaacaacgag gacgatgacgccgcgttggctgccatgatggcctttcaagaagagcaagacgaaggtgaa atacaaacagcacttgacaacgatgacgaagatgaaatcattaatgatcccaacattgcc ttcctcggtgatgacgaagacgatgaagtaaacaacaacgatgacggccagcaaggtgaa atcctccatccaaacgcaaacaaccccgcagcactcgccctccgtgcacgtcaagccctt caaaaccaacaacgtgctcatcatcaaatcatcctccagaatcaatcactgctacgaaga actattggctacttcacctccatgaggtatactcccctctcactcatggctgcctttgtt ctgattcattatactctccgaacgagacagcaattctatctaactgtcatatacctccaa tcgtctaagctatcctacatcgtattaggaaatgccattatcgcattggcaatcagtacc ttttcgttcgtgactcatttgtttctggatggggggttgagggtgaatgaacgggatgcg attggagagcatattaggtgggatgttacggagacttgtctcgctttgactatttttagg agtgagttggatgttgctacggcagtcatgtttttgggattggtcattatgaagtgtctc cattggagtgtggagttacgtggagggcatctacgaatgactgaagaagtactcgtctac cctgatcatgatgacgaagatgatgtcattcatgccaacgaaacaaacgacgatgcaaca ccagttactggtagcaacaacagtacaaacacccaaagaaagaaactcccttggtacaaa cgcctccctcaccttcgcctcacgcacattcgtttctacgcacttcttcaactcttactc ctcctcgacattttcgccgtggctcactgtgctctatcggtagcgacagatggaccaagt gtctccattctgtttgggtttgagtttgctattttgatggtgtcggtattgagtgctatg ggaatgtatcatatgcacgtgattgatggattgatggggttcttgcatcatgttgtggag ggagaacatcattattgtcctgtggggggaatggctgaggggggtccagtggaagaggga ggggagacgaatactgaagaggatgctgatgccattgaagagaacagcggaaatcagaac gagagcacagatacaactagtcctccgactgcacgaccaaagactctagcgaagactctc gtagaaagaattgccaatccgtggagagaccgtcgtgcaaccctctcctttgccatcgaa cttatggcacaagcagcaaagttcttattctacattgtcttcttcgcaatcgtattcaca tactacggcatgccgatcaacatctttcgcgaagtatacgtctcatttcaacaattgcgt cggcgtttaatggcattcaacaactaccgtcgcctgacacacaacatggataagcgattt gaaagcatccaagacgaagaagagttagatcgtctcggccacacttgtatcatctgccgt gatcaaatggatttgttgggaggatgtaagaagcttcctgggtgtgggcacgcctttcat actcattgtctgagggagtggttggtacagcagcaaacttgtccgacctgtagggctgac attgcagcaaatgaggccaggaggaaaaaggagttggaaagggagtctgctgcggaagtg ctggaagcaacgtcagaaacgcaagagacaggagtcgagggaagagatgctgcggccatg acaacccagtcagacgactggagtaagaacgtgggacaagccgagtatggatgcaccaag ttcaaatcctccgtcttctgttgcaacgggcaacgtcagtttcccttgcctctatcgtgt cgcatctcctttgggggcgcctgtctttccagctcatgcatctcccaatgcatttggggg agctcaaatgtttgcatcgccatctccgccagtaagaattattcctcggggacgggtgat tgtgtgtacttctattga

DBGET integrated database retrieval system