Thalassiosira pseudonana: THAPSDRAFT_24961
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Entry
THAPSDRAFT_24961 CDS
T01078
Name
(RefSeq) predicted protein
Organism
tps
Thalassiosira pseudonana
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_1
Kelch_6
Kelch_KLHDC2_KLHL20_DRC7
Kelch_3
Beta-prop_ATRN-LZTR1
Kelch_4
Kelch_2
NANM
Kelch_5
XdhC_CoxI
Motif
Other DBs
NCBI-GeneID:
7444005
NCBI-ProteinID:
XP_002294033
JGI:
24961
UniProt:
B8CD12
LinkDB
All DBs
Position
15:90946..93207
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AA seq
673 aa
AA seq
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MSFENDVDLTLWEPFPDVPNTSDDYRGYAMASSRDVVYISGGCSGNAIGSNNTKVNKSLI
SFNMSTRKWTELPNMNYHRWGHRLAVVEGGRYLFAIGGWGYKNNTSHGNTGNGKEKKKMS
IRSALRKVDIEEKHPIEKLTSYEVYDVSNHVWKEAGELNEPRRDFAMSVDCTSGKIYIFG
GVGTNGALSTAEVYNPYEGKWVYLNEALPEAKRWCHALLVGSLIHILDTGKNTLTYNTTT
NAWLEDPPDESIVPRCPSNGKVCTTSSFSEGQVLVYGYPVKDVDHGTLSNRWMIVHIGNN
KRCKSWTVLPPADEFMYYRCTASDGKLIIGTGNNMISFQITDNATEDGGSTVAPSSASSV
EGSLKGGSVLSGGGGRVVEPIKDDGTWKLQPEISSKPKDFRGYAVASAGDLLFISGGCSG
DGTLYRSFLCYNVVTQKWKKLPGMTHRRLGHKMAVSTDGRYLYVIGGGDGKTLRSMGVDV
YDVLKETWTAAPAMNHYRVFFGFTVCSKKIYVFGGIGSNNGSQLSSVEVYDPDTNGWEFV
SSMPEERGVCNVITVGHAIYVFGTPSQRVLSYDTLLDKWFEEIESPLPAMPPGGCVCAAS
AYIGGEVLVFKYPLRGQQNKHRRTAHIYNASSHSWKSVNLLDEFACYSAIVAGAKCVVVT
PQNQLQACILPRD
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcgaaaacgatgtcgaccttacgctatgggagcccttccctgacgttccaaat
acatcagatgactacagaggatatgccatggcatcgtcacgagatgtggtgtacatctcc
ggtggatgcagcggaaacgccattggcagtaacaataccaaagtcaacaagtctctcata
tcattcaatatgagcactcgtaaatggaccgagcttcccaatatgaactatcaccgatgg
ggacatcggctggcggtggtggaaggtggacgatatctgtttgcaattggaggatgggga
tacaagaacaatacgtcacatggtaataccggaaatggaaaggagaagaagaagatgagc
atacgaagtgctctgcgtaaggttgacattgaagagaagcatccaatagaaaagctcaca
tcgtatgaagtgtatgatgtgtcgaatcatgtttggaaagaggcaggcgaactcaacgaa
ccgagaagagactttgcaatgtcggttgattgtacctctggtaagatctacatctttgga
ggagtggggacgaatggagctctatcaactgccgaggtatacaacccatacgaaggaaaa
tgggtatatctgaatgaagcactaccggaggcgaagagatggtgtcacgcgttgttagtt
ggcagcttgatccacatacttgatactggaaagaacacactgacctacaatacgacaacc
aatgcatggcttgaagatcctcccgacgaatccatcgtccctagatgcccatccaacggc
aaggtatgcaccacatcttctttttcagaagggcaagtcttggtctacggatacccagtt
aaggacgtagatcatggcactctctccaatcgttggatgattgtgcacattggaaacaac
aaacgatgcaaatcatggactgtgctgcctccagcagatgaatttatgtactatcgttgt
acggcgtcagatgggaagctaatcattggtacgggaaacaacatgatttcatttcagatt
acagacaatgccaccgaggatggaggaagtactgttgctcctagttctgcttctagtgtt
gaaggatcgttgaaaggtggtagtgtgttgtctggtggtggtgggcgagttgttgagcca
atcaaagacgatggtacctggaagcttcaaccggagatatcatccaaaccaaaagacttt
cgtggatatgccgtggcatctgcaggagaccttctcttcatctctggaggatgctctgga
gacggaactctctaccgatctttcctatgctacaatgtagtcactcaaaagtggaagaag
ctgccaggaatgacgcatcgtcgcttaggacacaagatggccgtatctactgatggaagg
tacctctacgtaattggaggcggagatggaaagactttaaggagtatgggtgtcgatgtg
tatgatgtattgaaagagacatggacggctgcaccagcaatgaatcactaccgtgtattc
tttgggttcaccgtatgctccaagaagatatatgtgtttggtggtatcggttccaacaac
ggcagccaactctcatcagtggaagtttacgaccccgataccaatggatgggaatttgtt
tcgtcgatgcctgaagaacgaggagtctgcaatgtcattacagtcggtcatgcgatctac
gtctttggcactccttcacaacgagtgctatcgtacgataccttactagataagtggttc
gaagaaatcgagtcgccattgccagcaatgcctccgggaggttgcgtttgtgctgcctct
gcttatattggtggtgaagttctcgtcttcaagtatccattgcgaggtcagcagaacaaa
catcgacgaaccgctcatatttacaatgcttcgtctcacagttggaaatcagtgaatctt
ttggatgagtttgcatgctacagtgccatcgtggcaggagccaagtgtgttgtggttacg
cctcagaatcaattgcaagcgtgtattcttcctcgggattag
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