Thalassiosira pseudonana: THAPSDRAFT_25023
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Entry
THAPSDRAFT_25023 CDS
T01078
Name
(RefSeq) predicted protein
KO
K19985
exocyst complex component 6
Organism
tps
Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tps04131
]
THAPSDRAFT_25023
Membrane trafficking [BR:
tps04131
]
Exocytosis
Tethering complex
Exocyst complex
THAPSDRAFT_25023
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
THAPSDRAFT_25023
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec15_C
EXOC6_Sec15_N
STAS
COG2_C
Motif
Other DBs
NCBI-GeneID:
7443939
NCBI-ProteinID:
XP_002294249
JGI:
25023
UniProt:
B8CDI3
LinkDB
All DBs
Position
15:complement(564796..569345)
Genome browser
AA seq
1331 aa
AA seq
DB search
MMERNPNSTAAAVAAAPDPSLPAETNPNSTAAASAALLDGDTTAIYLSALRDLPASPQLC
TDLATTLVAYALAATMTVSTPNPFDSDDDEISVRKGGPPPDFTLSFGDEGMGVASPTNSD
VKQFQDVNPPQPSPTSAARFAQTQNEAHEKRARRRREEAVSRLVADATRPPDFLSEENIT
AAADEILKPAVGGVGGDAHWKQESNYAKLEARLRSQQHSTLLLASTVASSIERGLDRELH
SELVRQGKDAQSVISKICHDHSEDFLESVGKVVSALGGPCEEVRASLEEANQELQTGTGH
NMLTASIRLERFRHSDARARTLASMVHACRRVAVLLERARKQAALGRPRAALDAVEEARA
CLTAPVSSLIRGGGGADILLKFGLGSERATDKGPAADGKPVGSNANTSSSNPSHATVLRL
EDTPFGSRAMQMLPKIENEVLMGARRGLNRWFLALRSGGDGAKAGRAALRRCSSSVAVGP
GSLGLGGKIQSYAWRAKNADNLISRVSQKGKVARAARAGYWFERDCQREATRLEGSPGGM
GMGRRAEALASAFGWYRCWDEAMGEDLQTILKTEGTNEGKDNLDRSGHSGGGALNRSGHG
LNRSGHGRSLGFRATKGADGITNKRAGTSGKRSQWAEMLTPSVLADNPPAKDDDQAKLIG
LPETVHPVRRAELAFKMLGREEEFRNYYESNRFGDMKIGTQQNSDKDKSETRSSLSSLTG
DDVSLGTDRIFFAKSLPHLCASLVGFSAVEAALELDNFVDDDDGISGVGAAASGEKKDAA
KSGEKVAVRITATTGRGSSFRDSSERYERALVAELGNLLRKRAVGATLVELARASCLVAA
FRSALKIVHPSSTTRKSDKELLAMDVDIIMTALKVAQEEQLKATAKYVGDDKKEPMQVRR
SNVGNLRFNKNFGGSLSEGMTDSTSPSKAPQEETINFPFGLSDMKQRQIANALDAMDPSL
RTQRGSMNQIMAENELYTFSQSVPQIIRSIHARVIVFVAFALSQEELGQVFASKQGGGIA
GFILDCVEECVAVAAVGMKDGYTHFDELTVEQAVQITADISALQSTLPRLFGTIMRGLCH
IGLVKSDQVEQTFEYADSVLKGANKSCDTQVANMYSVVYEICRNKIDVLIDFSLENFSWV
CKTARDSPNAYAESLVEYMRTTFQCLGPMDDGSRAGLHFSCCGHVAERLVKLLTDSADEH
EGKTGITPVDKIDAFGLKNLAIDIEHFEAFADSTGVGQLRECFNELKSLSTALLDRDLPM
LLLPENNHARRRKYPFLSLEKVYCILEKYVGTGLGEKLMARGSGIVRNDFLLLEKKEVIQ
LTKIVKMQLTM
NT seq
3996 nt
NT seq
+upstream
nt +downstream
nt
atgatggagaggaaccctaattcgacggcggcggcggtggcggcagctcccgacccttct
ctgcctgcagagacgaaccccaattcgacggcggcagcttcggcggcgcttcttgacggg
gacacgactgctatctacctatcagcattgcgagacttgcctgcctccccacaactttgc
actgacctcgctaccacccttgttgcctacgctcttgcagctaccatgacagtgagcaca
cccaatccatttgattctgacgatgatgaaatttccgtccgtaaaggagggccaccgcca
gactttacgctgtccttcggtgacgaaggtatgggtgtagcctctcccaccaacagcgac
gtcaaacaattccaagatgtcaaccctccgcagccatctcccacctccgcagcacgcttc
gcacaaacgcaaaatgaagcacacgagaaacgagctcgtcgacgacgggaagaggcagtc
tctcgtttggtagcggacgccacgcgtcctcctgattttttgtctgaggagaatatcact
gctgccgcagacgagattttaaaacctgccgttggaggtgtcggtggagatgctcattgg
aaacaggaatctaattatgccaagcttgaagcccgtcttcgttctcagcagcactctaca
ttgctgcttgcatctaccgttgcgtcttccattgaacgtggcttggaccgtgaattgcat
tccgagttggtgaggcagggaaaggatgctcagagtgtgattagcaagatttgccatgat
cattctgaagactttctggagagcgtcggtaaggttgtcagtgctttgggggggccttgt
gaggaggttagagctagcttggaggaggccaaccaagaactccagaccggaactggccac
aatatgctcactgcatccattcgtctcgaacgattccgtcattcagacgcacgtgcgcga
acgctagcgtccatggttcatgcctgtcgccgggtagctgtattgttggaaagggcacga
aagcaagctgcattgggaagaccacgtgctgctttagatgctgtagaggaagctcgtgca
tgcctaacagctcctgtgagtagtttgattcgaggagggggaggagccgatatcttgctg
aagtttggtcttggcagtgaacgcgcgacagataagggccctgctgccgacggtaaacca
gttggttctaatgcaaatacatcctcatccaacccatcacatgccactgtccttcggttg
gaagatactccttttggatctcgtgcaatgcaaatgctgcctaagattgaaaatgaggtg
ctcatgggagcaagacgtggtctcaatcgctggttcttggccttacggtctggaggagac
ggtgccaaagcaggtcgtgcggcactgcgacgatgttcgtcctctgtcgctgtcggtcca
ggatcacttggtctgggtggaaagattcaaagctatgcatggcgagccaagaacgctgac
aacttgatttcaagggtgagtcaaaaggggaaagtggcaagggcggcgagagcaggatat
tggtttgaaagagactgtcaacgggaggcaacgaggttggagggctctcccggagggatg
ggaatgggacgcagggctgaggcattggcaagtgcttttggttggtatcggtgttgggac
gaagcaatgggagaagacttacagactattctcaagacggaaggaacgaatgaaggcaaa
gataatctcgaccggagtgggcacagtgggggaggagctttgaatagaagtgggcatgga
ttgaatcgcagtggacatgggagatcattgggatttagggcaacgaagggggccgatggg
ataacaaacaagcgagctgggacaagtggaaagaggtctcaatgggcagaaatgctgact
ccctctgttttggctgataatccgcctgcgaaagacgatgaccaagcaaagctgatagga
cttccagaaactgttcaccccgttcgtcgtgctgagttggctttcaagatgttgggcaga
gaagaagagttccgcaactactacgaaagcaatcgtttcggggatatgaagattggcacc
caacagaacagtgataaggacaaaagtgaaactcgcagttcattgtcatcgttgactgga
gacgacgtctctctgggcactgatcgtattttctttgccaaaagtctgcctcacctctgt
gccagcttggttggtttcagcgccgtagaggctgcacttgagctggataactttgttgac
gacgatgatggtatttccggagttggggctgctgcctcgggagaaaagaaggatgctgcg
aagtcgggtgaaaaggtcgctgttcgcatcactgcaacaacaggccgaggatctagcttc
agagacagctctgagcgttacgagcgtgctttagtggcggagttggggaatctattgagg
aagcgtgctgtgggggcaactttggtagagttggcaagggcttcgtgtcttgtggcggcg
tttaggtcggcacttaagattgttcacccaagctcaacgactcgaaagagcgacaaggag
ctgcttgctatggacgtggatatcatcatgacggctttgaaagtggcacaagaggagcaa
ctgaaagcaactgcaaagtatgtcggagacgataagaaagaaccaatgcaagtaagacgt
tccaatgtgggtaatcttcgcttcaataagaattttggagggtctctatcggaaggtatg
acagacagcacttctccctctaaagcaccacaagaagagacgataaactttccgttcgga
ttaagtgatatgaaacaaaggcaaatcgctaacgcacttgatgcgatggacccttcactg
aggacacaacgtgggagtatgaaccaaattatggccgagaacgaactctacacgttcagc
cagtctgtaccacagattatccggtcaatacacgcacgtgttattgtctttgttgcattt
gcattgagtcaagaagaacttggacaagtctttgcttcgaagcagggtggaggtatcgct
ggtttcatattggattgcgttgaggaatgcgttgctgtggctgccgtcggaatgaaggac
ggttacacccacttcgacgagttgactgtagaacaagcggtgcaaattactgccgacatt
tcggctctgcaatctactcttcctcgcttattcggcacaatcatgagagggctgtgtcac
attgggttggtgaaatcagatcaggttgaacagacgtttgaatacgcagattccgtactc
aaaggtgccaacaaatcatgcgacactcaggttgcaaacatgtacagcgtggtgtacgag
atctgtcgcaacaagatcgacgtgctcattgacttctcgttggagaatttctcttgggtg
tgcaaaactgctcgagattcgcccaatgcttatgcggagagtctagtggagtatatgcga
acaacattccaatgcttgggacctatggatgacggatcaagggctgggttgcatttctcg
tgttgtggccatgtagcagaacgtctggtgaaactgttgacagattctgccgatgagcac
gaagggaaaactggaattacacccgtcgacaagattgatgcatttggattgaagaattta
gccattgatatcgaacactttgaagcattcgctgatagtactggcgtagggcaattgaga
gagtgtttcaacgaactcaaatctctatccacagcattattggatagagatctacccatg
ctattgctgccagaaaacaatcatgccaggagacggaagtatcctttcctatcactcgaa
aaggtgtattgcattttagagaagtatgtcggcacgggcttgggcgaaaagctcatggcg
agaggatcgggtatagtcaggaacgactttcttttgctcgagaagaaggaagttattcag
ctgacaaaaattgtgaagatgcaactgacaatgtaa
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