KEGG   Thalassiosira pseudonana: THAPSDRAFT_25153
Entry
THAPSDRAFT_25153  CDS       T01078                                 
Name
(RefSeq) predicted protein
  KO
K13124  mitogen-activated protein kinase organizer 1
Organism
tps  Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:tps00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tps03041]
    THAPSDRAFT_25153
Spliceosome [BR:tps03041]
 Complex C
  Other components
   Complex C specific factors
    THAPSDRAFT_25153
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_SPT8 Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_RIG_2nd Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_Vps41 Ge1_WD40 Aft1_OSA
Other DBs
NCBI-GeneID: 7442543
NCBI-ProteinID: XP_002296815
JGI: 25153
UniProt: B8LCP2
LinkDB
Position
16
AA seq 422 aa
MAFPSSYSPYSTPYTDTYNLHDSFYHGDYNDAPSLPVAELRGHDGPIHVVRFSGESGAPD
GKYCITGGNDRTVRLWNPTRIDPAYRPPRTTSTGNSAVSSQDYYRRQHQTKSLHDEPSKL
PQHLPSALPMQTYTEGHMHPIHSITVNSTSNVLLSSSDKTLVATDLVTAQVKQKWWGHGG
RIECVSCLGGSSSGTSGSGGGGGGSTSEEVYATSSYDATVRLWDSRSRSKDPLMILEEAK
DAVTCVASGGEGDAQIVTSSVDGKIRTYDLRTAQLLTEDIRHPITSFSLGHDNTTIASSC
LDGSIRLWDRSSQNNASRTKIFQRMRNVHKGGNYKLDCAFTSNDKYIFSGSECGAVVVYM
VSSSNDGDGKARGTKLERHTGPTCSVATCPQSQRPWLALSASYDGSAVVWASQEEAEHCL
EG
NT seq 1269 nt   +upstreamnt  +downstreamnt
atggcctttccatcctcttactcgccttacagcacaccctacaccgatacgtataacttg
catgattctttctatcatggtgactacaacgatgcaccatcgttgcccgtggcagagttg
agaggacacgatggtcccattcacgttgttcgtttcagtggtgagagtggtgcacctgat
ggcaagtactgcatcaccggaggtaacgaccgaacagtacgtctgtggaaccccactcgt
atcgatcctgcctatcgtccacccagaactacttcaactggcaactctgctgtatcttct
caagattactatagacgacaacatcagactaaatcactgcacgacgaaccgtcaaagcta
ccgcagcatcttccttcggcactaccgatgcagacctacaccgaagggcatatgcacccc
attcactccatcactgtcaattctacatcaaatgtattgttatcaagcagtgataagacg
ttggtggcaactgatttggtcactgctcaagtgaagcaaaagtggtgggggcatggaggg
aggattgaatgtgtttcctgcctcggcggttcatcgagtggtaccagtggaagcggtggt
ggaggaggagggagtaccagtgaagaagtatatgcaacatcctcctatgatgctacggtt
cgcctatgggatagtagatcaagatcaaaagacccattgatgatattggaagaggcaaag
gatgcagttacatgcgtggcgagtggaggtgagggggatgctcagattgttacctcgagt
gtggatggaaagatacgaacgtacgatctacgaacagcccagcttcttactgaggacata
agacatcctataacttccttctctctcgggcatgacaatacaactattgcatcgtcgtgt
ttggacggttcaatccgattatgggatcgttcttcacaaaacaatgcctctcgtacaaag
atatttcaaagaatgaggaatgtgcacaaaggagggaactacaaactagactgtgcattt
acttccaatgacaaatatatcttttcggggagtgaatgtggtgctgtagtggtgtatatg
gtctctagctccaacgatggtgatggaaaggcaagaggaacaaagttggaaagacataca
ggaccgacttgctctgtggcaacttgtccacaatcacaaaggccatggttagcgctgagt
gctagctatgacgggagcgccgtggtttgggcaagtcaagaggaggcagagcattgcttg
gaaggttga

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