Thalassiosira pseudonana: THAPSDRAFT_25246
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Entry
THAPSDRAFT_25246 CDS
T01078
Name
(RefSeq) predicted protein
Organism
tps
Thalassiosira pseudonana
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
7453146
NCBI-ProteinID:
XP_002294363
JGI:
25246
UniProt:
B8CE28
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Position
17:262485..265590
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AA seq
835 aa
AA seq
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MNPGTSTLDDDGGGEGPSFASSSAAVSTTSRSSSAVMGEAGVLLTSSSPPSMNTNHSTSI
SIPSASNTSNQSGSGGNSTSTSSEQPSLNILNQVDNISQLNIHNTSFDPSSIVGLGVGGG
AGLSSSLGSSISSVGGMNNNNGGTQQHRRVSTGMPDALGRGGGGIVDGNSIPLGTHRRQS
TSPNLHLNVGSRNNSGGVLSNSLGGQQQQQMNSGVLLGGAAGGGQQQQSMNNNNNGQQQP
LMLPSFLMQGTTTPTNSNNNNQVVAVDGSAVVQQVGGGQNTGASLAGVLLGVQRPTTTQL
PATTNTTTQSQATLGQSNLLQPVSLQPGIQQVQSVVVGGTSALFPTDVALGNANTNGSST
VVSSSSSSGGVTGSGSGTILGTAMVGGSVSNGQQLQQPQGGVQLVQTTTSNLHQQQQQQP
SQQLIQLQTTSGHPTTQVAMQQQPTPQQQQLAQPGQITQPGTTATSQTVQQQHAQQVQMV
DQLQMQQVQQQMQQFQIHDNGGMGMPQQGIMMGQQQPPPHLQQVPKQNQLGRVPATKHDN
RKLFVGGLPNEVTDESFLRYFEQYGTVVDSVVLLDRRTKRSRGFGFVTFADEDVANSLLK
VIPGRTGRVTMLGKICEVKASEPKTAETQYITFHQGHHPNMRMMQGGGWMGSPNQHYGQH
QRIVYTNGGGGGYQNQQGMPMQMPPNFYGGPSPDGSNSNAVYSHSTITRTMGPITSADDI
PGAAGGGQEGRPTVYIQNNYYTLPTGAEMPGQQMNPSDGGGAPAPAGAMGGDNNLQLQLQ
QQQQQQQVLVDQGQNFAPYEYSGGNAWEPSYPGPEVDGGQQHQQYQQHQQNYSQY
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgaatccggggacatccaccttggacgacgacggcggcggcgaaggaccatcgtttgcc
tcttcttcagcggcagtatcaacaacatcacgatcgtcgtcggcagtgatgggcgaggcc
ggggtgttattgacatcctcgtcgccgccatcgatgaacacgaaccactccacctccatt
tccattccctctgcctccaacacgagcaatcagtccggcagcggtggcaacagtacttcc
accagctccgaacagccgagcctcaacattctcaaccaagtcgacaacatctcccaattg
aacattcacaatacgagctttgacccttcgtccatcgtcgggcttggtgttggcggtggt
gccggattgagtagctctcttggcagctcaatcagcagtgttggcgggatgaacaacaac
aacggagggacgcagcagcatagacgagtctccaccggaatgcccgatgccctgggccgt
ggcggtggaggcatagttgacgggaatagcattccgcttggaactcatcgacgacagagc
acctcgcccaatttgcacttgaatgtggggagccgcaacaatagcggcggcgtgttgagt
aattcgttgggtgggcaacagcaacaacagatgaactcaggagtgctgttgggtggtgca
gctgggggtggccaacaacaacaatcgatgaacaacaacaataatggacaacagcagccg
ctcatgcttccctcgtttctaatgcaggggacgacaacacctaccaacagcaacaacaac
aatcaagtggtagcagtggatgggtcagctgtcgtgcagcaagttgggggagggcagaat
acgggggccagcctcgcgggcgtgctgctgggagttcaacgtccaactactactcagctt
ccagcaacgacaaatactactacccaatctcaagctacgttaggtcagtcgaatctgctg
cagcctgtatctcttcaacctggaatacaacaggtgcaatcagtggtggtggggggaact
tctgccttgtttcctacagatgttgctcttgggaatgctaataccaatggatcatctacg
gttgtgtcttcttcgtcatcttcggggggtgttactggaagcggtagcggtactattctg
gggacagcaatggtgggaggtagtgttagtaatggtcaacagctgcaacaaccgcaggga
ggagttcagttagtccaaactacgacttccaatcttcatcaacaacagcagcagcagcct
tctcagcaattgatacagttgcaaactacctccggtcatcctacaactcaagtagcgatg
caacagcagcctacgcctcaacaacaacaactcgcacagcctggtcaaattactcaaccc
ggcaccaccgccacttctcaaacagtgcagcaacaacacgcacagcaagtgcaaatggta
gatcagcttcaaatgcaacaggtccaacaacaaatgcagcagtttcaaatccacgacaat
ggaggaatgggaatgccacagcaggggataatgatggggcaacaacaaccaccaccacat
ttacagcaagttccgaagcagaatcaactggggagagttcctgctacgaagcatgataat
cgcaagttgtttgtgggtggtttgccgaatgaagtaacggacgaatcattccttcgttac
tttgaacagtacggaacagtggtagattctgtagtgcttcttgataggaggacgaaacgc
tctcgtggctttgggtttgttacttttgcagatgaggatgtagcaaactctcttctcaaa
gtaatcccaggacgcactggacgtgtcaccatgctcggcaagatctgcgaggtcaaggca
agcgagccgaaaacagccgagacacagtacattacttttcaccaaggacatcaccccaac
atgcgcatgatgcagggaggaggatggatggggtcacccaatcaacattacggacagcat
cagcgaatcgtctacaccaatggaggaggaggtggatatcaaaatcagcagggcatgccg
atgcaaatgccaccaaacttttacggaggaccatcaccagacggaagtaattcaaatgca
gtgtactctcattcaaccattactcgtactatgggaccgattacttctgcagatgatatc
ccgggggctgctggcggtggtcaggagggtcggccgactgtttacattcagaacaactac
tacactcttccgactggggctgagatgcctggacagcagatgaatccttcggatggaggt
ggggcgccagcacctgcgggggcaatgggaggagacaacaatcttcaactacagctacaa
caacagcagcagcagcagcaagtgttggttgatcaaggtcagaactttgctccgtacgaa
tactctggaggcaatgcttgggagccctcctatccgggccccgaagtcgatggagggcag
caacatcaacagtatcagcaacaccagcagaactactcacaatactag
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