KEGG   Thalassiosira pseudonana: THAPSDRAFT_25248
Entry
THAPSDRAFT_25248  CDS       T01078                                 
Name
(RefSeq) predicted protein
  KO
K06316  oligosaccharide translocation protein RFT1
Organism
tps  Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:tps00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:tps02000]
    THAPSDRAFT_25248
Transporters [BR:tps02000]
 Other transporters
  Electrochemical potential-driven transporters [TC:2]
   THAPSDRAFT_25248
SSDB
Motif
Pfam: Rft-1 CEP104_N CEP104-like_TOG
Other DBs
NCBI-GeneID: 7444201
NCBI-ProteinID: XP_002294478
JGI: 25248
UniProt: B8CE33
LinkDB
Position
17:complement(273298..277418)
AA seq 1272 aa
MASSSTAATSAAARGTLLSVLLRLTSFLLSQLTVRHVSVSTLGKANIVLELLLGTALFVG
REGFRLGLTKNIAGVANGSSGEEEKEDANGASPGDGGVPTKRKFQQHESYLDENKKENRQ
RDEQQMQQQRIINVSWLSVPTGAVMSILAVLMHLYSCSSNNNTSNANASEMMDYKLAGIL
YCIASFIESLSEPLVIRCLQEMDVTTKAKAEGAALVCKAVACFGMLHLTSSVWFWEAMKT
IATRLELGVGGSGGQVCFAVTAFGVSQLVYAITFTTIMFRKARATKDGIRWPKRIHPFVS
NPYRSDDTTAHQTQSGTTPLTQNFDLHTLHLILIFTLQGLFKHALTEADKIVLSTLAGSY
DQGVYALASSYGGLAARLLLQPLEENARLLFSRQGALLAQQLQDATTTNGSREKDTQQYE
KKQTIGGGPNNLLSDLESTYCFLLRAVLYIGLIFATIATNYTSLLLRILAGDRWGSNSEA
SAALSAFCVYTAFLALNGTTEAFVYGVARSGRDVGKLGVAHAVVGGIFALISPGLVRSKG
AVGLVTANCVCMGLRSAYSLYYARTYFAKAEEALSGGKNDRISMISQIAPHPVVLALFSM
AYAVTKSSRDVLYDGALADGAVWTVAALTHVLVGILSLALTMTVSLYFESDIRASFPLLD
GNDLVPLPFNVVECSSEEHGCESSALHSYREDSNGWQSSCQGPTPHTLVLKIQHHDEERM
VHRLEILCHEYKVPEKVEIILASGCADEEIPSLFDECESILHLGYITMDPNERSDYQDRE
LKSIPIGKPADFIRLVIPRCHKNSLNPDNQVGIVGIKVLGVEAAIDDVSIEKEEEIVVVE
SENLILPTTTDEITEAPILNVALSPPLKKLHNILTPVSSLPSRIKHELDPKMQQSVDRLE
RFKKERAALEDFDTAAKAKEALGTVYALLITYKESESKMREAAAIEEYAEASRLKTERDT
MRKAAMQALSEVEQTFIEQREDAVEVLSISTIKDESFVSQRSARSIHPFSESEQYHEMGN
ISNTCSQSGANETCLEEHEEDRNDSGGEESEDDSNDSHPLSGVNDAEELPTPEEIDYESV
DVSSDLVKKVDHIFGEYRAKCFFSKNWQLREAALAKMTLLIPSVCGGSSAEECAEILCNI
VVRSIGDKNVQVYLAGLILLDESLLQFERSELPQTKITPLLSKIIIELLGKLAESKTKVV
DSAELSLLSIAHSSCVDISYICNAGTKRVKSTDSKGGRTVKARLQFMDNLIAEFGDEVGW
KRVLEFAKGKVA
NT seq 3819 nt   +upstreamnt  +downstreamnt
atggcctcgtcatccacagcagccacatcagctgccgcccgaggaacgctcctctccgtc
ctcctccgtctcacgtcattcctcctctcgcagctcactgtccgacacgtctccgtgtcc
accttgggcaaggcaaacattgtactggagttgttgttgggaactgctttgtttgtgggt
agagagggatttaggctgggattgacgaagaacattgccggcgttgccaatggtagtagc
ggtgaggaggagaaagaagatgccaacggtgcatctcctggtgatggtggtgtaccaacg
aagaggaagttccaacagcatgagagctatcttgacgagaacaaaaaggagaacagacaa
agagacgagcaacagatgcaacaacaacgcatcatcaacgtttcgtggctttctgtaccg
accggcgcagtaatgtcaatacttgcagtgttgatgcatctctactcgtgcagcagcaac
aacaacacaagcaacgctaatgcatccgaaatgatggactacaaactagccgggatatta
tactgcattgcatcctttattgagagtctatccgaaccactggtgatacggtgcttgcaa
gaaatggatgtgactaccaaggcgaaggccgagggggctgccttggtctgcaaggctgtg
gcatgctttggcatgttgcatttgacaagcagcgtttggttttgggaggctatgaaaaca
atcgcgacacggttggagttgggagtgggaggaagtggaggccaagtttgctttgcagtg
actgcctttggagtctcgcaactagtgtatgcaatcacctttacaacaatcatgtttcga
aaggcgagggctacgaaagatggaatacggtggccaaaaagaatccatccattcgtatca
aatccctaccgcagcgatgacacaacagcccatcaaacacaatcaggaacaacaccctta
acacagaactttgacctccacacccttcatctaatactcatctttacactacagggattg
ttcaaacatgcattaacagaagcagacaagattgttctctcgacactggcaggatcgtat
gatcagggagtatatgcactcgcttcttcgtatggagggttggcggcacgtttgttgctg
cagcctttggaggagaatgcacgtctgctgttttctcgtcagggggcattgttggcacaa
caactgcaagatgctacgacgacaaacggtagcagagaaaaagatacacaacaatatgaa
aagaagcaaacaatcggaggcggaccaaacaatctgctcagtgacctcgagagtacctac
tgcttcctccttcgagcggtcctttacattggattaatctttgcaaccattgccacaaat
tacacttccctcctccttcgcatcctcgccggagatcggtggggatcaaactccgaagcc
agtgcagcactatctgcattctgtgtctatacagccttccttgccctcaatggcaccact
gaagcattcgtatacggcgtggctcggtcgggaagagatgtgggtaaactgggtgtggct
catgcagtggtggggggaatctttgcattgatttctccaggattggtgaggagcaaaggt
gccgtggggttggtgactgccaattgtgtttgtatgggattgcgttcggcgtactcgttg
tactacgcgaggacgtactttgcaaaggcagaggaggcgttgtcgggaggaaagaatgac
agaatcagcatgatttctcaaatcgcacctcatccagtagtattggctcttttcagcatg
gcatatgcagtgaccaaatcttcgagggatgttctttacgatggagcacttgccgacggt
gcagtctggactgttgcagctttaacgcacgtgcttgttggtattttgtcattagctttg
acgatgacagtctctctgtactttgagtctgacattcgagcaagtttccctcttcttgat
ggcaacgacctcgttccacttccgttcaatgttgtagaatgcagcagtgaagagcacggg
tgcgaatcatcggctttgcatagctacagagaggacagcaatggatggcagtcgagctgt
caaggtccaacgccccacacgctagttctgaaaatccagcatcacgatgaagaacgcatg
gtgcacaggctcgaaatactctgtcatgaatacaaggttcctgaaaaggtggagattatc
ctggcaagtggatgtgcagatgaagaaataccatcgttatttgacgaatgcgagtccatt
ctccacctcggatacatcaccatggatcctaacgaacgatcagactaccaagatcgtgag
ttgaagagcatccctattggaaagcctgctgactttattagattggtcatcccacgatgc
cacaagaactcattgaaccctgacaatcaagtcggtatcgttggaatcaaagttttggga
gtagaagcagctatagatgatgtatcaatagagaaggaggaggagatagttgttgttgaa
agtgaaaatcttatcttgccgactaccactgatgagattacagaggcgccaattctaaat
gttgcactgagccctcctcttaaaaaactacacaacattctcaccccagtgagctctttg
ccatcgcgaatcaaacatgaattagatccaaaaatgcaacaaagtgtggatagactagaa
cggttcaagaaggaaagggcggcgttagaggactttgatacggctgcaaaagcgaaggaa
gctcttggaacggtgtatgctctcttgataacatacaaagaaagtgaaagcaagatgcgt
gaggcagcagcaatagaggagtatgccgaagcatctcggttgaaaacggaacgtgatact
atgcgaaaggctgcgatgcaagccttatcggaagtggagcaaacgttcattgaacaaagg
gaggatgcagtagaagtactttcaatcagtacaatcaaagacgaaagcttcgtctctcaa
aggtcagctcgttcaatccaccccttcagtgaaagtgagcaataccacgaaatgggaaac
attagcaatacatgttcacaatcaggagccaacgagacatgtctggaggaacacgaggag
gatcgaaacgactctggtggcgaggaaagtgaagacgacagcaacgactctcatccgttg
tcaggtgtgaatgacgctgaggagttgcctacgccagaggaaatcgactatgaaagcgta
gacgtctcgtcagatcttgtaaagaaggttgatcatatctttggagagtaccgagcaaag
tgtttcttctccaagaactggcaactgcgtgaggcagcactggctaaaatgacgcttctc
attccttctgtttgcggaggttcgtcagccgaggaatgcgctgaaatattatgcaatatt
gttgttcgttccattggcgacaagaatgtccaggtctacctcgcaggacttattctcctt
gacgaatccctactgcagtttgaacgaagcgaattgccgcagaccaaaatcacacctctg
ttatcaaaaatcatcattgaactccttggaaagctggccgagagcaagacaaaagtcgtt
gatagtgcagagctgtcgttgctatcaattgcacattcgtcttgtgttgatatttcctac
atctgcaatgctggtacgaagcgagtcaaatccacagattccaaaggtggccgtactgta
aaggcacgtcttcaattcatggacaatctcattgctgaattcggagacgaagttggatgg
aagcgagtcttggagtttgcaaaaggtaaggtagcatga

DBGET integrated database retrieval system