Thalassiosira pseudonana: THAPSDRAFT_25484
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Entry
THAPSDRAFT_25484 CDS
T01078
Name
(RefSeq) predicted protein
KO
K14798
protein LTV1
Organism
tps
Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tps03009
]
THAPSDRAFT_25484
Ribosome biogenesis [BR:
tps03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
THAPSDRAFT_25484
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LTV
Motif
Other DBs
NCBI-GeneID:
7446317
NCBI-ProteinID:
XP_002297054
JGI:
25484
UniProt:
B8LDC4
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Position
19
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AA seq
630 aa
AA seq
DB search
MGKKKPFIDKKSASVFHVVRRSQRDVGVEATAETLSDFVLMPSPDNEKRAAAAASNTNAT
SATATTASKQHKKASVDFTALKSQLSAAGLLDQTATTYSKYTKPIQGGGTFISSSDATSS
DNTYIPNNGNASYASTTTTADINQLLTDTSKNDLDVALQEAMAVREVGRMLDSIALTPDC
MEEDVAHMLFDEYENGEYEEILDDFCLTANMEPESDDDEEGGGEFNFEEHIRRLMEKAKM
KENGEEGGRQLEEDFFGDVKPLHQRVIEEDGEDNYDYDQYGEEEEDSLDREFNGEEDSLD
REFNGEQSADGYSKPINGEQQRILCKKFEEALLEYDSDDVGDLDEECEDIVGERPLEGDA
QLEAALNEFLTEKEDEVLIEGTKHLESYKRTGGSGYSALVGKTMVHASELNADDVDPSKN
LLINIEESKKQMQKDLAEADEFLANPEVDLPPEEIFIDGKSYFTERTQNPWDCESILSTY
SNLDNNPVVIGRSSRSKKKRGNKKSTMNDEESNVIPEDAPVKIQLSNKTGLPIGVFANHN
NQHQPQDDDGEYDNYYNESDTFLSVNKGEARDKTESATEKKMRKMAIKDERKICRMQKKI
MKEAFKYEFQQRGSADVVDAVGGTTVFRFS
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagaaaaagccattcatcgataagaaatcagcctccgtcttccacgtcgtccgt
cgctctcaacgcgacgtgggcgtggaggccacggcagaaacactgagtgatttcgtattg
atgcccagtccggacaatgaaaagcgagctgccgccgctgcttctaacaccaatgcaacg
agcgccacagccacaactgcgtccaaacaacacaagaaggcgtctgtcgacttcaccgcg
ctcaagtcacaactctctgcggcaggtctattagatcaaaccgccaccacatactccaag
tacacaaaacccatccaaggcggaggaacattcatctcttcgtccgatgccacatcctcc
gacaatacctacattccaaacaatggcaatgcctcctacgcctccaccaccaccaccgcg
gacatcaaccaacttctcaccgacacctccaagaatgatttggatgtggcattacaagaa
gccatggccgttcgtgaagttggtcgaatgctggattccatcgctctcactccggattgt
atggaggaggatgtggcgcacatgctttttgacgagtatgaaaatggagagtatgaagag
attttggatgatttctgtttgactgccaatatggaaccggagagtgatgatgacgaggaa
ggtggtggcgagtttaactttgaagaacatattcgacggcttatggagaaggcaaagatg
aaggagaatggagaggagggaggacgtcaattggaagaggacttttttggtgatgttaaa
cctttgcatcaacgggtgattgaggaagatggcgaggataactatgactacgatcaatac
ggagaggaagaggaggatagtctcgacagggagttcaatggagaggaggatagtctcgac
agggagttcaatggagagcagtcagctgacggttattccaagccgatcaatggagagcag
caacgcattctctgtaaaaagtttgaggaggcactgttggaatatgattcggacgatgtt
ggggatctagatgaagagtgtgaggatatcgttggtgaacgtcctttggagggagacgca
caacttgaggcagcactgaatgaattcctaaccgaaaaggaggatgaggtattgattgag
ggtaccaagcacttggagtcttacaaacgaactggtggcagtggatactcagccttggtg
ggcaagacgatggttcatgccagtgaactcaatgctgatgacgttgatccatccaaaaat
ctcttgatcaacattgaagagagcaagaagcaaatgcaaaaggatctggcagaagcagat
gagttccttgccaatcctgaagtggatctccctccagaagagatctttattgacggcaag
agctacttcactgaaagaactcaaaacccatgggattgcgagagtatattgtcgacgtat
tccaatttagacaacaatccggtagtcattggaagatcgtcccgatctaagaaaaaacga
ggcaacaagaagagtacaatgaatgacgaagagtccaatgttatccccgaagatgctccg
gtcaagattcaactatccaacaagacgggtctacccattggagtatttgccaaccacaac
aaccaacaccagccacaagacgacgacggcgaatatgataactattacaacgaaagcgat
acattcctcagcgtcaacaagggagaagcacgtgacaaaactgaatcagccacggaaaag
aagatgcgaaagatggcaatcaaggatgaacgaaagatttgcagaatgcagaagaagatt
atgaaggaggcgtttaagtatgagtttcagcagaggggtagtgcggatgttgttgatgct
gttggggggactactgtgtttcgattctcgtga
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