Thalassiosira pseudonana: THAPSDRAFT_2552
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Entry
THAPSDRAFT_2552 CDS
T01078
Name
(RefSeq) predicted protein
KO
K05539
tRNA-dihydrouridine synthase A [EC:1.-.-.-]
Organism
tps
Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tps03016
]
THAPSDRAFT_2552
Transfer RNA biogenesis [BR:
tps03016
]
Prokaryotic type
tRNA modification factors
Dihydorouridine synthases
THAPSDRAFT_2552
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dus
Motif
Other DBs
NCBI-GeneID:
7450402
NCBI-ProteinID:
XP_002287352
JGI:
2552
UniProt:
B8BUP5
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All DBs
Position
2:1271028..1272201
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AA seq
353 aa
AA seq
DB search
MPNGEIKEFHIAPMLDVSTVEFRYFMRLLTKRAFIWTEMVVAETLWHQSNQKGVLSSGDD
LELEPDLKRHCGWYEDQYLNPHPVVCQIGTNDPKQAEFATRVVHKLGYDRIDLNAECPSD
RVAGREFGAALMRDHDTAIEVVRAMVDTAQSTKSDNPIPVSVKTRIGVDEFDTFEHLEGW
VQRLVDAGCTWFIIHARKVYTQGLSPAQNRTVPPLNYPRVYRLLQRFPSCDFWFNGGIMS
LEHAKQVAFGYTGVGDSDLIRETSSEETDCIDDDHTVPCQRCGVPHGSCIAPPRMSLPNL
KGVMVGRLARDHPSELATIDSHFYGEASDPCKNRRELMENTATFVASFVLNPQ
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgcccaacggagagataaaggagttccacattgctccgatgctcgacgtgtctacagtc
gagtttcgttacttcatgcgtctgttgacgaaacgagcattcatctggacagagatggtc
gttgcagaaacactgtggcatcaaagcaatcagaagggtgtgctctcttcgggtgatgac
ttggaattggaacctgatctgaaacgtcactgcggttggtacgaagatcaatacctcaat
ccgcatcctgtcgtttgccagatcggaaccaacgatcctaaacaagctgagtttgctact
cgtgtggtacacaaactgggatatgatcgtattgatttgaatgcagagtgtccatctgat
cgggtggcagggagagagttcggcgcggcactaatgagagatcacgatactgccatcgag
gtcgtacgtgcaatggtcgatactgcacaatctacgaagtcggacaatccaattcctgtc
tctgtgaaaacacgtatcggtgtggacgagtttgatacttttgagcatctggaaggttgg
gtacaacgtcttgtggatgcaggctgtacttggttcatcattcatgcaagaaaggtgtat
actcaagggctgagtccagcgcaaaatagaacagtgcctcctttgaattaccctcgagtc
tatcgtttgcttcaacgatttccgtcgtgtgacttttggtttaacggaggcatcatgagt
ttagagcacgcaaaacaagtggcatttgggtatactggagttggagacagtgatctgatt
agagaaacaagctctgaagagacggattgtattgatgacgatcacactgtaccgtgtcag
cgctgtggcgtgccccacggatcgtgcattgcaccaccacggatgtctcttccaaactta
aaaggcgtaatggttggtcgacttgcaagagatcatccatcagaattagcaacaattgac
agtcacttttacggagaggcatcagatccatgcaaaaatcgacgagagctaatggagaat
actgcaacgtttgtcgcgagtttcgtgctcaatccacaataa
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