Thalassiosira pseudonana: THAPSDRAFT_25812
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Entry
THAPSDRAFT_25812 CDS
T01078
Name
(RefSeq) predicted protein
KO
K02941
large subunit ribosomal protein LP0
Organism
tps
Thalassiosira pseudonana
Pathway
tps03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
THAPSDRAFT_25812
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
tps03011
]
THAPSDRAFT_25812
Ribosome [BR:
tps03011
]
Ribosomal proteins
Eukaryotes
Large subunit
THAPSDRAFT_25812
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RL10P_insert
Ribosomal_L10
Ribosomal_60s
Motif
Other DBs
NCBI-GeneID:
7448264
NCBI-ProteinID:
XP_002295206
JGI:
25812
UniProt:
B8CG46
LinkDB
All DBs
Position
23:complement(41621..42758)
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AA seq
323 aa
AA seq
DB search
MPLSAERKQQYFSTMKELMTTYSKCFIVEIDNVGSMQIQQTRLALRGKAEVLMGKNTMMR
KCIREFVEENPDTPIAQLEACCRGNVGFVFTNGDLGAVREVLESNVRPAPARVGAVAPID
VIVPKGPTGCDPGQTAFFQTLQIATKITKGQIEMTTDTHLISAGERVTASQAALLQKLAM
EPFTYGLVLKSVYDSGSLFDAKVLDITDDVLAAKFVSALNTISKLSLALNIPTQASVTHS
IANAFKAILSVTVELENYSFDKADIYKAYLADPSAFAGSGGGGGGGGDGGETSAAAAVEE
VEEEEAPPAVDMFGGGDGGGGDY
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgcctctctctgccgaacgcaaacagcagtacttcagcaccatgaaggagctgatgacc
acgtactccaaatgcttcatcgtcgaaatcgacaacgttggatccatgcaaattcagcaa
actcgtcttgctcttcgtgggaaggctgaagtactcatgggaaagaacaccatgatgagg
aagtgcattcgtgagtttgtcgaggagaaccccgatacccccattgctcagcttgaggct
tgctgcaggggaaatgttgggttcgtcttcaccaatggtgatttgggtgccgtgagggag
gttttggagagcaatgttcgtcctgcccccgcccgtgttggagccgttgctcccatcgac
gtgattgtgcccaagggacctaccgggtgtgatcctggtcagactgccttcttccaaact
ttgcagattgctaccaagattaccaaggggcagattgagatgactacggatactcacttg
atcagtgccggtgagagggtgactgcttcccaggctgctcttttgcaaaagttggctatg
gagccattcacctacggtttggttctcaagagtgtctatgactctggatctctctttgat
gccaaggtgttggatatcaccgatgatgttctcgccgccaagttcgtctcggcactcaac
accatctccaagttatccttggcactcaacattcccactcaggcatctgtcacccacagt
attgccaacgccttcaaggccattctttcggtcaccgtcgagcttgagaactactccttt
gacaaggctgatatctacaaggcttaccttgctgatcctagtgcctttgctggttctggt
ggtggcggaggaggtggcggcgacggtggagagacttctgcggctgctgctgttgaggaa
gtggaggaagaagaggcccctcctgccgtggacatgttcggaggcggagatggtggagga
ggagattattag
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