Thalassiosira pseudonana: THAPSDRAFT_260789
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Entry
THAPSDRAFT_260789 CDS
T01078
Name
(RefSeq) cation efflux protein
Organism
tps
Thalassiosira pseudonana
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Gene cluster
GFIT
Motif
Pfam:
Cation_efflux
ZT_dimer
DUF3599
DUF6535
Motif
Other DBs
NCBI-GeneID:
7449726
NCBI-ProteinID:
XP_002286008
JGI:
260789
UniProt:
B8BT33
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Position
1:433077..434729
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AA seq
534 aa
AA seq
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MHMGHSHSHHHHHDHSSSNKNNNTPFSSNKQKYLVPKGWKGHLLSLTSRKAIRILFAGLI
TLVPRLLKCIQHRSLLKISKRDIAAFVLLSGILAISDSIRDEAKAVIDKGQSWRLSMVKH
STPLSADYFFRNDNAADRVTFLGVIINLVLSSGKAVVGVMCHSSALIADAGHSLSDLFSD
FVTLWAVQVARLPPDEDHPYGHGKFESVGSLFLSLTLLGTGLSRVQGIAAAAKLVEVPTW
PALVVAGLSILSKEWLYRITRRVGEKLNSQVVIANAWHHRSDAYSSVLALISIGLAMSVP
GFLAADPAAGMLVAGMIAMTGAEIMGESMKQLTDAVTDEEMIKSVESVASEDADVKDVVR
VRARQVGSKALVDVEVSTPQDFSASAMKAIEERIRVRVLSDVSGVLDVEVRATAEDVVFC
PLLTAMDDSDLEHQISATQVEGKAREVLEAHPDVKSVEAVTVHYQDTVLVRVDANIILND
SSCTVSEANGIAKALRKKLEESEDNNIDQANIFLDLNADMSSEENSSRERVLSP
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgcacatgggacacagccactcccatcaccaccatcacgatcactcctcttccaacaaa
aacaacaacaccccattctcttccaacaaacaaaagtacctagtacccaaaggatggaaa
ggccacctcctctcactaacctcccgtaaagcaattcgcatcctcttcgcaggactcatc
accctcgtaccacgcctactcaaatgcattcaacatcgatcactcctcaaaatatccaaa
cgagacattgccgccttcgttctcctctcgggtatactcgccatatcggactccatccga
gacgaagccaaggcagtcatcgacaagggccaatcgtggcgtctctccatggtgaaacat
agcacacccctatcggcagattacttctttcgcaacgacaatgccgcagatagagttacg
tttctaggagtgattatcaacttggtattgagttcaggcaaggccgtggtgggggtgatg
tgtcattcttcggcgttgatcgccgatgcgggacattcgttgagtgatttgttttcggac
tttgtgacattgtgggctgttcaggtggcgaggttgccccccgatgaggatcatccgtat
ggtcatggaaagttcgagagtgtcggttcgttgtttctttcgttgacgttgttggggacg
gggttgagtcgagttcaggggattgcagcggctgccaaacttgtggaggtgcctacttgg
cctgcattggtggtggcagggttgtcgattttatcgaaggagtggttgtatcgtatcacg
agacgtgtgggagagaagctcaattctcaggttgttattgccaatgcatggcatcatcgt
tcggatgcttactcatcagtgttggcgttgatatcgattggtttggccatgtcagtgcct
ggattcttggcagcggatcctgctgctggaatgttggtggcaggaatgattgctatgact
ggtgctgagattatgggtgaatcaatgaaacaactaacggatgcagtgacggatgaggag
atgatcaagagtgtggagagtgtggcatcagaagatgcagacgtcaaggatgtagtgagg
gtacgagcaagacaggtgggatcaaaggcattggtagatgtagaagtgtccactcctcag
gacttttcggcctcggcaatgaaggcaattgaggaacgtattcgtgtacgagtattatca
gatgtaagcggggtgctcgatgtggaagtccgggccactgccgaagacgtggtgttttgt
ccactgctcactgccatggatgactcggatctagaacatcaaattagtgcaacacaagtg
gaggggaaagctcgtgaggtgctggaagcacacccagatgtcaagtctgtggaagctgtg
actgttcattatcaagatacggtattagtacgagtggatgccaacattatcttgaacgat
tcgagttgcactgtttcagaggctaatggcattgcaaaagctttgagaaagaagttggag
gagtcagaggacaataatattgatcaggcgaacatattcttggatcttaatgcagacatg
tcgtcggaggagaatagttcgcgagagcgagtactctcgccgtag
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