KEGG   Thalassiosira pseudonana: THAPSDRAFT_260805
Entry
THAPSDRAFT_260805 CDS       T01078                                 
Name
(RefSeq) SRP54, signal recognition particle 54 kDa protein 2-like protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
tps  Thalassiosira pseudonana
Pathway
tps03060  Protein export
Brite
KEGG Orthology (KO) [BR:tps00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    THAPSDRAFT_260805
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:tps02044]
    THAPSDRAFT_260805
Enzymes [BR:tps01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     THAPSDRAFT_260805
Secretion system [BR:tps02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   THAPSDRAFT_260805
  Eukaryotic Sec-SRP protein
   THAPSDRAFT_260805
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N nSTAND3 Zeta_toxin cobW AAA_33 AAA_16 AAA_30 AAA_22 nSTAND_NTPase5 MMR_HSR1 APS_kinase MeaB ResIII CbiA MobB AAA_19 AAA Arf NPHP3_N
Other DBs
NCBI-GeneID: 7453406
NCBI-ProteinID: XP_002286615
JGI: 260805
UniProt: B8BT81
LinkDB
Position
1:complement(548885..550399)
AA seq 451 aa
MVLAELGGKLRDSLRKLQSPSGDAITAETLNGILSEISRALIESDVNVKLVMTLRSNIQK
KVGALVSSDNANSAANNANIARLVQRAVVDELTSMLTPNGENATKAYVMKRGKPNIILFV
GLQGAGKTTSIAKYAHYYQRKGWKTAMVCADTFRAGAFDQLKQNATKLRIPFYGSYTEAD
PVLIAEEGVERFISDGYEIIIVDTSGRHRQEETLFEEMQEISAAVRPDNTIFVMDATQGQ
AVYDQALAFHGAVNVGSVIVTKLDGHAKGGGALSAVSATGSPIVFLGSGERFEDLDPFNA
KSFVSKLLGFGDVRGLMEEMKSLNSDKNQEELMKNMQKGQFTLRDMYKQFQQVMKIGPLN
KVMGMLPGMPEYLMPQNGDDESTNRLRKFMYMMDSMNDAELDGKIDLHAKNDKSVEKRIN
RIAAGSGTHPTEVKMLLQAHKQFEGMVSKMG
NT seq 1355 nt   +upstreamnt  +downstreamnt
atggtgctcgctgagctcggaggcaaactccgcgactccctacgcaagctccagagcccc
tccggtgacgccatcaccgccgaaactctcaatggcatcctctccgagatctcccgcgcc
ctcattgaatccgacgtcaatgtcaaactagtcatgacgttgcggtccaatattcaaaag
aaggttggagctttggtctccagtgacaatgccaatagcgccgcgaataatgccaatatt
gcgaggttggtacagcgagcggtggtggacgagttgacgtccatgctgacacctaatggg
gagaatgcgacaaaggcgtacgtgatgaaacgaggaaagcccaatatcatcctctttgtc
ggactccagggagctggtaaaacgacttccattgccaaatacgctcactattatcaacgc
aaaggatggaagacagcaatggtatgtgccgatacctttcgtgcaggagcctttgatcag
ctcaaacaaaatgccaccaaattacgaattcctttttacggtagctataccgaagctgat
ccagtcctcattgctgaagagggtgtcgaacgattcatctcagatggatatgaaatcatc
attgttgatacctctggtcgtcatcgtcaagaagagacactgtttgaagaaatgcaagaa
atctcagcagcagttcggccggataatactatcttcgtcatggacgccacgcaaggacaa
gcggtgtatgatcaagctttggcatttcatggtgcagtgaatgtggggagtgtgattgtg
accaagctggatggtcatgcaaagggtggtggggctctgagtgctgtttcggctacgggg
agtcctattgtgttcttggggagtggggagaggtttgaggacttggatccattcaacgca
aagtcatttgtttcaaaactccttggctttggcgatgttcgagggctcatggaggagatg
aaatcgctcaacagtgacaagaatcaagaggagctcatgaagaacatgcaaaagggacaa
ttcacgctccgcgacatgtacaagcaattccaacaagtgatgaaaattggtccactcaac
aaagtcatgggcatgctgccggggatgcctgagtatctcatgcctcagaatggtgacgac
gaatcaacaaaccgcttgcgtaagttcatgtacatgatggacagtatgaatgacgctgaa
cttgacggtaagattgatctacatgcaaagaatgacaagtcagtggagaagcgcatcaat
cgcattgcggctggctcaggaacccatcccaccgaagtgaaaatgttattgcaggcacac
aaacagtttgaaggaatggtttcgaagatgggtaa

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