KEGG   Thalassiosira pseudonana: THAPSDRAFT_260833
Entry
THAPSDRAFT_260833 CDS       T01078                                 
Name
(RefSeq) ABC transporter
Organism
tps  Thalassiosira pseudonana
SSDB
Motif
Pfam: ABC_tran AAA_21 ABC_tran_Xtn SMC_N ABC_tran_CTD AAA_23 MMR_HSR1 AAA_29 AAA_22 AAA_15 ATP-synt_ab NACHT RNA_helicase AAA_18 AAA_25 RsgA_GTPase DUF87 MeaB NB-ARC DUF7365 SKA2 SR_plectin_7 NPV_P10 COG6_N DUF6468 FapA
Other DBs
NCBI-GeneID: 7444162
NCBI-ProteinID: XP_002286667
JGI: 260833
UniProt: B8BQ64
LinkDB
Position
1:complement(862582..865112)
AA seq 627 aa
LDSASYVLPRGARVGLVGRNGCGKSTFLRILAEACGGEATSGGKVECPRDVKVAFVEQEP
PSPSDVTVSDALSVSTGGLMSVYEAVRQYRLASLNASDDPDGFATAAQKMDATNGWAVLT
KADEVSTRLRVKHLEDQPLSSLSGGERKRVALAAALVQEPDVLILDEPTNHLDLAAIRWL
GDLVQEKRKMTLLTVTHDRAFLAEVCNSILELDRGTFYSHPGSYQTYLEGKEERLANEDQ
AIRDAKTKYRRELEWMRRQPQARETKQKARIDAFYKLEKSTKPRVTDPSLELTDGQRRLG
GNILKLRNVSLSFGENKKMLDDFSYDFNKGDRIGIVGRNGVGKSTFVKIITEQQAIDSGS
IEAGETVVFGLYDQMGIPFLNEQQTVLDFVKDRVESGSGASMAEAPSEAMKLLKQFQFPR
QRWNERVSMLSGGERRRLQLLSVLTKRPNFLILDEPTNDIDLDTLTALESYLEDFKGVLV
IVSHDRSFTDKVTNHLFVFEGNGIVKDYLGSLSDYAECLVEQEKTFDTDTGSSSSADSVD
SETKKILHKEDREKRNQRRNAIKKMKRELSKIEPAIEKLKTKAKEIQAKIDDSSDEGWTV
LAELTEKVQALNEEVEEKEMEWLEIAD
NT seq 1883 nt   +upstreamnt  +downstreamnt
cttgattctgcatcttacgttttaccgcgcggtgcgagagttgggctggtgggaagaaac
ggatgtggaaagagtacctttctaagaatactggccgaagcatgcgggggtgaagctacc
agtggggggaaagtggaatgcccacgagatgtcaaagtggcatttgtagagcaagaacct
cccagtccatcggatgtaaccgtatcagatgctctctctgtatctacaggaggactcatg
tcagtgtacgaagcagtacgtcagtatcgccttgcatcactaaacgcctccgatgatcct
gacggatttgcaaccgcggctcaaaagatggatgcgacaaatggatgggcagtgctaacg
aaagcagatgaggtgtcgacgcgattgagagtaaagcatttggaggaccagcctctgagt
agtctttcgggaggagagagaaaacgagttgctttggctgctgcattggtacaggaacca
gatgtgttgattttagacgaaccaaccaatcacctggatctcgcagcgattcgctggctc
ggtgatttggtacaagagaaaagaaagatgacattactcacggtgactcacgatagagca
ttccttgcagaagtatgcaactccatccttgaactagacagaggtaccttctacagccat
ccgggatcgtatcaaacatatttggaggggaaggaagaacgactggcaaatgaagaccag
gctatacgcgatgcaaaaacaaagtacaggcgtgaacttgagtggatgaggcgtcagccg
caggcaagggagacaaagcaaaaggctaggatagatgcattctacaaactggaaaagtca
acaaagccaagagtaacagacccctcattggaacttacagatggacaacgaaggttgggt
gggaatattctaaagctgcgaaatgtgtctctgagctttggtgaaaacaagaagatgcta
gacgacttcagctacgacttcaacaagggcgatcgaatcggtatcgtaggaagaaacggc
gtcggtaagtccaccttcgtcaaaatcattacagagcaacaagcaattgactcggggtcc
attgaagcaggagaaactgtcgtgtttggcttgtatgatcaaatgggcattccttttctc
aatgagcaacagactgtgctggatttcgtcaaggatcgtgtagagtctggttccggtgct
agcatggcagaagcaccttctgaagcgatgaagctactcaagcaatttcagttccctcgt
cagcgctggaatgagcgagtatccatgctgagtggaggagaaagacgtcgtctccagctg
ctatcagttctgaccaagcggccgaactttctcattcttgacgagccaacgaacgacatt
gatctggatactctgactgcactggaatcttatcttgaagatttcaaaggtgtcctcgtc
attgtcagccacgatcgctcgttcacagataaggtcacaaatcatttgtttgtcttcgag
ggcaatggaatagttaaagattatcttggctcgttgtctgattacgcagagtgcctcgtc
gagcaggaaaagacgtttgatacggatactggatcatcatcctctgctgattctgtagac
agcgaaaccaaaaagatattgcataaagaggacagggagaagagaaatcagcgtagaaat
gcaattaagaagatgaagcgagagctttcgaagattgaacctgccattgagaagctgaaa
accaaggcgaaagagatacaagcgaagattgacgatagctcagacgaaggatggactgtg
ctagcagagctaacggagaaggtgcaagcgctaaatgaggaagtagaggagaaggaaatg
gagtggctagagattgccgatga

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