KEGG   Thalassiosira pseudonana: THAPSDRAFT_260833
Entry
THAPSDRAFT_260833 CDS       T01078                                 
Name
(RefSeq) ABC transporter
Organism
tps  Thalassiosira pseudonana
SSDB
Motif
Pfam: ABC_tran AAA_21 ABC_tran_Xtn SMC_N ABC_tran_CTD MMR_HSR1 AAA_23 AAA_15 AAA_22 AAA_29 ATP-synt_ab NACHT AAA_18 AAA_25 DUF87 NB-ARC MeaB RsgA_GTPase DUF7365 SKA2 CLIP1 SR_plectin_7 NPV_P10 Phage_ProQ_C_like COG6_N SAC3 DUF6468 FapA
Other DBs
NCBI-GeneID: 7444162
NCBI-ProteinID: XP_002286667
JGI: 260833
UniProt: B8BQ64
LinkDB
Position
1:complement(<862582..>865112)
AA seq 627 aa
LDSASYVLPRGARVGLVGRNGCGKSTFLRILAEACGGEATSGGKVECPRDVKVAFVEQEP
PSPSDVTVSDALSVSTGGLMSVYEAVRQYRLASLNASDDPDGFATAAQKMDATNGWAVLT
KADEVSTRLRVKHLEDQPLSSLSGGERKRVALAAALVQEPDVLILDEPTNHLDLAAIRWL
GDLVQEKRKMTLLTVTHDRAFLAEVCNSILELDRGTFYSHPGSYQTYLEGKEERLANEDQ
AIRDAKTKYRRELEWMRRQPQARETKQKARIDAFYKLEKSTKPRVTDPSLELTDGQRRLG
GNILKLRNVSLSFGENKKMLDDFSYDFNKGDRIGIVGRNGVGKSTFVKIITEQQAIDSGS
IEAGETVVFGLYDQMGIPFLNEQQTVLDFVKDRVESGSGASMAEAPSEAMKLLKQFQFPR
QRWNERVSMLSGGERRRLQLLSVLTKRPNFLILDEPTNDIDLDTLTALESYLEDFKGVLV
IVSHDRSFTDKVTNHLFVFEGNGIVKDYLGSLSDYAECLVEQEKTFDTDTGSSSSADSVD
SETKKILHKEDREKRNQRRNAIKKMKRELSKIEPAIEKLKTKAKEIQAKIDDSSDEGWTV
LAELTEKVQALNEEVEEKEMEWLEIAD
NT seq 1883 nt   +upstreamnt  +downstreamnt
cttgattctgcatcttacgttttaccgcgcggtgcgagagttgggctggtgggaagaaac
ggatgtggaaagagtacctttctaagaatactggccgaagcatgcgggggtgaagctacc
agtggggggaaagtggaatgcccacgagatgtcaaagtggcatttgtagagcaagaacct
cccagtccatcggatgtaaccgtatcagatgctctctctgtatctacaggaggactcatg
tcagtgtacgaagcagtacgtcagtatcgccttgcatcactaaacgcctccgatgatcct
gacggatttgcaaccgcggctcaaaagatggatgcgacaaatggatgggcagtgctaacg
aaagcagatgaggtgtcgacgcgattgagagtaaagcatttggaggaccagcctctgagt
agtctttcgggaggagagagaaaacgagttgctttggctgctgcattggtacaggaacca
gatgtgttgattttagacgaaccaaccaatcacctggatctcgcagcgattcgctggctc
ggtgatttggtacaagagaaaagaaagatgacattactcacggtgactcacgatagagca
ttccttgcagaagtatgcaactccatccttgaactagacagaggtaccttctacagccat
ccgggatcgtatcaaacatatttggaggggaaggaagaacgactggcaaatgaagaccag
gctatacgcgatgcaaaaacaaagtacaggcgtgaacttgagtggatgaggcgtcagccg
caggcaagggagacaaagcaaaaggctaggatagatgcattctacaaactggaaaagtca
acaaagccaagagtaacagacccctcattggaacttacagatggacaacgaaggttgggt
gggaatattctaaagctgcgaaatgtgtctctgagctttggtgaaaacaagaagatgcta
gacgacttcagctacgacttcaacaagggcgatcgaatcggtatcgtaggaagaaacggc
gtcggtaagtccaccttcgtcaaaatcattacagagcaacaagcaattgactcggggtcc
attgaagcaggagaaactgtcgtgtttggcttgtatgatcaaatgggcattccttttctc
aatgagcaacagactgtgctggatttcgtcaaggatcgtgtagagtctggttccggtgct
agcatggcagaagcaccttctgaagcgatgaagctactcaagcaatttcagttccctcgt
cagcgctggaatgagcgagtatccatgctgagtggaggagaaagacgtcgtctccagctg
ctatcagttctgaccaagcggccgaactttctcattcttgacgagccaacgaacgacatt
gatctggatactctgactgcactggaatcttatcttgaagatttcaaaggtgtcctcgtc
attgtcagccacgatcgctcgttcacagataaggtcacaaatcatttgtttgtcttcgag
ggcaatggaatagttaaagattatcttggctcgttgtctgattacgcagagtgcctcgtc
gagcaggaaaagacgtttgatacggatactggatcatcatcctctgctgattctgtagac
agcgaaaccaaaaagatattgcataaagaggacagggagaagagaaatcagcgtagaaat
gcaattaagaagatgaagcgagagctttcgaagattgaacctgccattgagaagctgaaa
accaaggcgaaagagatacaagcgaagattgacgatagctcagacgaaggatggactgtg
ctagcagagctaacggagaaggtgcaagcgctaaatgaggaagtagaggagaaggaaatg
gagtggctagagattgccgatga

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