Thalassiosira pseudonana: THAPSDRAFT_260856
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Entry
THAPSDRAFT_260856 CDS
T01078
Name
(RefSeq) actin, actin related protein
KO
K11662
actin-related protein 6
Organism
tps
Thalassiosira pseudonana
Pathway
tps03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
THAPSDRAFT_260856
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tps03036
]
THAPSDRAFT_260856
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tps04812
]
THAPSDRAFT_260856
Chromosome and associated proteins [BR:
tps03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
THAPSDRAFT_260856
SWR1 complex
THAPSDRAFT_260856
Cytoskeleton proteins [BR:
tps04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actin-related proteins
THAPSDRAFT_260856
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
HSP70
Motif
Other DBs
NCBI-GeneID:
7445642
NCBI-ProteinID:
XP_002286111
JGI:
260856
UniProt:
B8BQB1
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All DBs
Position
1:964202..965212
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AA seq
203 aa
AA seq
DB search
QEHAIRRLDIGGKVLTNLLKEAVTYRQWNMMDEYHIVNDAKEQLCFVSDQFDKEMKQARI
VRRGMRWFDREYLLPDFMNTFRGTQKRREQESLERQALAMSVERFAIPEVLFRPSDIGLD
CDGIAEGIVESISACDATLRAAMYNNVLLVGGNARMPGYKERVEVELRKLAPVNYSVCVY
LPEDSISYAWEGSKEFAKQPDFQ
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
caggaacacgcaatcagacgactggatattggtggcaaagtactgacaaacttgcttaag
gaggcagtaacatatcgtcaatggaatatgatggacgaataccacattgtcaatgatgca
aaagaacaactatgcttcgtcagtgatcaatttgacaaggaaatgaaacaagcacgcatc
gtccgaagaggaatgcgttggtttgatcgagaatacttgcttccagactttatgaatacg
tttcggggaacacagaaacgaagggagcaggaatcactagagcgacaagcccttgcaatg
tcagttgaacgtttcgcaatacccgaagttctctttcgtccttctgatattggtctagat
tgtgacggaatcgccgaggggatcgtagagtcaataagtgcttgtgatgcaacgttgaga
gcagcaatgtacaacaatgtgttattggtcggtggtaatgcgagaatgcctggttacaag
gagagagtagaggttgagctgaggaagttggctcctgtgaactattctgtttgtgtgtat
ttaccagaagattctatctcgtatgcatgggagggttccaaagaatttgcaaagcagccc
gacttccag
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