Thalassiosira pseudonana: THAPSDRAFT_260900
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Entry
THAPSDRAFT_260900 CDS
T01078
Name
(RefSeq) tRNA synthetase
Organism
tps
Thalassiosira pseudonana
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Motif
Pfam:
tRNA-synt_1c
tRNA-synt_1c_C
tRNA-synt_1c_C2
BDI_1685-like_C
Motif
Other DBs
NCBI-GeneID:
7451427
NCBI-ProteinID:
XP_002286742
JGI:
260900
UniProt:
B8BQK8
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Position
1:complement(<1200451..>1202429)
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AA seq
538 aa
AA seq
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ITTRFPPEPNGYLHLGHAKAVSFNFAVARVFANGKGRCHMRLDDTNPSKEDEEYVQSILE
DVRWIQQGENVGPWFGDVRKTSDYFQLIYDAAIYLIENGEAFVDELSAEEMREYRGTLTE
PGKDSPWRTRSVEENLDLFKKMRNGDFPDGKYVLRAKIDMSSPNLNMRDPVIYRIKHESH
QATGDEWCIYPMYDFSHPISDAVEGISHSLCTLEFEDHRPLYDWTAERALKAGLVDVQPR
QIEFSRLNLKYTVLSKRKLIKLVEDKFVSGWDDPRMPTLSGIRRRGVPPSAIRLFCERMG
ISKTDSNIDFTIMEDCAREVMDGESPRAFAILDPLKVTIKNWSGSLENFEVPRHPKREEL
GDRTVPFGSSLYIERSDFFDLEAPKGFKRLLPDGKVRLKYAYVISCDEVVRDPTTNEPVE
LVCSYYPETRAGVTPEGEARVNGIIQWVEASTAARCQVMQYDRLFKTEEPGKESDNFTDD
INTESLQVLDNVIVEPSVAIDALSLTYQFERSGYFALDSSSTEKNLVFNRVVTLRDTW
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atcaccactcgtttccctcctgaaccgaatggctatcttcacttgggacacgctaaagcc
gtttcgttcaactttgccgtagcacgtgtctttgcaaatggaaaggggagatgtcatatg
cgattggacgatacaaatccttccaaagaagatgaagagtacgttcaatccatcttggaa
gacgtgcgatggattcaacaaggggagaacgtgggcccttggtttggagacgtgcgaaag
acatcggattactttcaattgatttatgatgcagcaatttacttgattgagaatggagag
gcgtttgtggatgaattgtcagctgaggagatgagggagtaccgtggtacgcttacggag
ccagggaaagatagtccttggagaactcgcagtgttgaagagaacttagatttgttcaaa
aagatgaggaacggagatttccctgacggcaaatacgttcttcgtgccaagattgacatg
tcatcacccaaccttaacatgcgcgaccctgtcatctaccgaatcaaacacgaaagccat
caagctacaggagatgaatggtgcatctatcccatgtatgacttttctcatccaatttca
gatgcagtggaaggaatctctcattcactgtgcactcttgagtttgaggatcatagacca
ctttatgattggactgcagaaagggcattgaaagctggactcgttgatgttcagcctcgt
caaatcgagtttagtcggttgaatcttaaatatactgttttgtcgaagagaaagttgatc
aaactcgtggaggacaagttcgtcagtggatgggacgacccaagaatgccaacgctttcg
ggaataagacgaagaggagtacctccatcggcaattcgtctattttgcgaacgtatggga
atctccaaaacagattcaaacattgactttacaattatggaggattgcgcacgagaggtg
atggacggggaaagccccagagcgtttgccattcttgacccgttaaaggtgacgatcaag
aactggagtgggtctcttgagaactttgaagtaccgcgccatccaaagcgggaggaactt
ggcgatcgaactgttccatttggaagctctttgtacatagaaaggagcgatttctttgat
ttggaggcaccaaaaggattcaagcgtcttcttcccgatggcaaggttcgtctcaaatat
gcatatgtcattagttgcgatgaagtggtacgagacccaacaaccaatgaaccggtggag
cttgtgtgtagctattacccagaaactcgagcaggagtgacgccggaaggcgaggcacgt
gtaaacggtatcatccagtgggtcgaagcatcgactgcggcccgttgccaagtcatgcag
tacgatcggttgttcaagaccgaagaacctgggaaagaaagcgacaactttactgacgat
atcaacactgaatcgttacaggttcttgacaatgtgattgttgagccctcagttgcgatt
gatgctttgtccctgacttatcaatttgaacgaagtggttattttgcgttggattcttcc
tccacggagaagaatctagtctttaatcgcgtcgttacactgagggatacgtgg
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