Thalassiosira pseudonana: THAPSDRAFT_261056
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Entry
THAPSDRAFT_261056 CDS
T01078
Symbol
APB3
Name
(RefSeq) beta subunit of clathrin adaptor protein AP3
KO
K12397
AP-3 complex subunit beta
Organism
tps
Thalassiosira pseudonana
Pathway
tps04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
THAPSDRAFT_261056 (APB3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tps04131
]
THAPSDRAFT_261056 (APB3)
Membrane trafficking [BR:
tps04131
]
Endosome - Lysosome transport
Others
AP-3 complex
THAPSDRAFT_261056 (APB3)
Endosome - Golgi transport
THAPSDRAFT_261056 (APB3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
HEAT
HEAT_2
Motif
Other DBs
NCBI-GeneID:
7452517
NCBI-ProteinID:
XP_002286324
JGI:
261056
UniProt:
B8BRI8
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All DBs
Position
1:2059872..2063558
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AA seq
956 aa
AA seq
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TSTTCTVAMDWSTANPIPASAMADAANAASSALSSISESTSGLYNSTLVSSAMSTIGDAQ
FFEESISPSTVRTHTTLNLLKGMKWLLANMSKGRNVSDFFPHVVKLVGAPNLEVRKMVYI
YLARYANHDAQCREMALLSINAFQRGLADREPLLRSLALRVLTCMDVPDVLQLQIMGVQT
CCKDSSPYVRKCAANAVGKLHPRCLVVGDGAQAEQLINIITKLLEEDGSTMVLTSAMIAF
CEICPQRLELLHGCYRKMCHLLTDMDEWGQVMVMDALTRYCRTFFKQPRGQMKGSAERID
RERRVTRSTRKMGSQVGSGVETEIARFDDDEDNDLDEDHKLLLDSSFSLLKSRNSAVVLA
VCSLHYYCGIASIKIRTALGKALVRIHRDRREIQYVVLVSIRTLVQECPSAFTPFLNDFF
VKGMDPSFTRMIKLDILVSLCIDPAAIDAVLSELRTYVRHNDKPFACAAIRAVGKDSDCA
RADANLIALNCLSGLVSLSEFSKNDLVVGECAETIQRILSQLWSKDTELKMQLVNDPAKV
QEHAAVASTLWLVSEWATMTEAKAVIRLEILRLLASSFSELDPQIKLQGVHLSSKVLLML
KTEQSSPATADKEGALCEFILAMGRIDVLQDVRDRSRYESNILHASIILTRDTSTLQSAP
EGSTLSDDKAKSIVQAETDMFRFGTLSSVMSSRTSVSGLPLPKWANVNSSGSLRDQSVDN
VDGTAGSNNEDMYSSSSEEDSSSSSSSSSAGDSSSSEESDSDEESTSGSDDSTVEDKPVT
LDAFGSNGFGINPTIPVPTQRNNTQVASLLNNDTDDSSSSSSDYDSDSSSESDDSSKEVV
PAQPSVGNIFDMDSVPSNAVPVQYAKQVSNGSSVAAGLEDLIMTPLVVDRDDADVSSNGS
NESGPWIEFVKSELAGGLSVRMRFVHGRSRIKEAKMMGLDSDNTSTVCLQAHIENK
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
acttccaccacctgcaccgtcgccatggactggtcaacagccaatcccatcccagcctcc
gcgatggccgatgccgccaacgccgcatcctccgccctctcctccatcagcgaatccacc
agcggcctctacaactccaccctcgtctcctccgccatgtccaccattggagatgcacag
tttttcgaggagagcatctcaccctccacggtacgcactcatactacgctgaatctactc
aaggggatgaagtggttgctggccaacatgtccaagggacgtaatgttagtgacttcttc
ccgcatgtggtgaagttggtgggtgctcccaatttagaggtgaggaagatggtctacatc
tatctagcaagatatgccaatcatgatgcacagtgccgtgaaatggcattactcagtatc
aacgcctttcaacgaggtttggcagatagagaacctttattgcgatcattggcgctacgg
gtattgacttgtatggatgtcccggacgtattgcagctgcaaatcatgggagttcagacg
tgttgcaaagattcaagcccctacgtgagaaagtgtgcagccaatgcagtggggaagttg
catccacgttgtttagttgtgggggatggagctcaagcggagcaattgatcaatatcatt
acgaaactgttggaagaggatgggagtacgatggttctcacctcggccatgattgcgttt
tgcgagatttgcccccagcggttggaattgctccatggatgttatagaaagatgtgtcac
ttgttgacagatatggatgaatgggggcaagtgatggttatggatgccttgactcggtat
tgcaggactttcttcaaacagccaagggggcagatgaagggatcggcggagaggattgat
cgggagaggcgagttacgaggagcactagaaagatggggagtcaagtaggaagtggagtg
gaaacggagattgcgaggtttgatgacgacgaagacaatgacttggacgaagatcacaaa
ctgctattggactcgtcgttttcgttgctcaagagtagaaactcagctgttgtactagca
gtttgttccttgcattactattgcggaattgcaagtatcaagatacgaactgctcttggg
aaggcattggtcagaatacacagagatcgccgtgaaatccaatatgttgtcttggtttcg
attcggactcttgtgcaagagtgtccttccgcattcactccctttttgaatgatttcttt
gtcaaaggaatggatccgtcattcacaagaatgatcaaacttgacattcttgtgtcctta
tgcattgatcccgcagcaattgatgctgtcctctcggaacttcgtacgtatgttcgccac
aatgacaaaccgtttgcttgtgcagccatccgtgctgtaggaaaggattctgattgtgct
cgggcagatgccaacctcattgcattgaattgtctttcgggacttgtctctctatcggag
ttttcaaagaatgacttggttgttggagagtgtgctgaaacaatacaacgcatcttatcg
cagctttggtctaaagatacggagctgaagatgcagttggtgaacgatccagcaaaggtt
caggaacacgctgcagttgcgtctacgttgtggttagttagtgaatgggcgacaatgact
gaggctaaagctgtgatccgtttggaaatactgcgattactggccagctcgttcagtgag
ctggacccacaaatcaaactacagggtgttcatctttcaagcaaggtgttgttgatgctc
aaaacagaacaatcatcacctgctacagctgacaaagaaggtgccctctgtgaattcatt
ctagcaatgggcagaattgatgtcctgcaggatgtgcgcgaccgatctaggtatgaaagc
aacatcttgcatgcatccattattctcactcgcgacaccagtacactgcagtcggcacca
gaaggttctactctcagtgatgataaggcaaagtcaattgtacaggctgagacggacatg
tttaggtttggcaccttgagtagtgtcatgagcagcagaacgagtgtctcaggtcttcct
ttgcccaaatgggcaaacgtcaacagctcgggttctctccgtgatcaatcggtggacaat
gttgatggcacagctggttcaaacaacgaggacatgtacagctcctcttccgaagaggac
tcctcatctagttcttcgtcatcttcagcaggtgatagttcatcttccgaagaatcagac
tccgacgaagagagtactagtggcagcgatgatagcacggttgaagacaaacctgttact
cttgacgcttttgggagcaatggatttggtatcaacccaacaatacctgttccgactcag
cgaaacaatacacaagtggcttcacttctcaacaatgacacggatgattcgtcctcctcc
tcttctgactacgacagtgacagcagtagtgaaagtgacgactcttcaaaagaagtcgtt
ccagctcaaccgtcagttggaaatattttcgacatggattctgtgccatccaatgccgtt
cctgtgcaatacgcgaagcaagttagcaacggttcatctgttgcggctggtcttgaagac
cttatcatgactccacttgttgttgacagagacgatgctgatgtgtcttctaatggcagt
aatgaaagtggcccttggatagagtttgtgaagtctgaacttgcgggtggcttgtcggtg
agaatgcgatttgtccatggtcgctctaggatcaaagaagcgaagatgatggggctggat
tctgataacacgagcacagtttgtcttcaggcgcacattgagaacaagtga
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