Thalassiosira pseudonana: THAPSDRAFT_261140
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Entry
THAPSDRAFT_261140 CDS
T01078
Name
(RefSeq) UDP-galactose:N-acetylgalactosamine-alpha-R beta 1,3-galactosyltransferase
KO
K00731
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase [EC:
2.4.1.122
]
Organism
tps
Thalassiosira pseudonana
Pathway
tps00514
Other types of O-glycan biosynthesis
tps01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
THAPSDRAFT_261140
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
tps01003
]
THAPSDRAFT_261140
Enzymes [BR:
tps01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.122 N-acetylgalactosaminide beta-1,3-galactosyltransferase
THAPSDRAFT_261140
Glycosyltransferases [BR:
tps01003
]
Glycan extension
Type 3 chain
THAPSDRAFT_261140
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Motif
Other DBs
NCBI-GeneID:
7452531
NCBI-ProteinID:
XP_002287036
JGI:
261140
UniProt:
B8BS86
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Position
1:complement(2683392..2684159)
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AA seq
256 aa
AA seq
DB search
KIMCLVYTMADAHANRIRAMRDTWAGGCDGFLAFSTESDPRLPAISLEHDGPEEYNNMWQ
KIRSIWKFVGTHYLEDYDWFFIGGDDLFVLPHNLKTYLASLTQKDGTDPKTKEYFVGRRF
NSGGTNGYFNSGGAGYSLSQATLRKFFANIEDAQHCSAKSHTSMEDVMIARCLSYLGIHF
TDTRDARGRERFHPFAPGSHLHWSPPGPGKPRDWYEDYNKEWGILTGTDCCAPDSVSFHY
IKKASMVRHMQSLLYF
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
aagatcatgtgtttggtgtacaccatggcagacgcccatgccaatcggatacgagccatg
agagacacgtgggctggtgggtgtgatggcttcttggctttctcgaccgagtcagatcct
agactgccagctatatccttggagcacgatggtcccgaagagtataacaacatgtggcaa
aagattcgaagtatttggaagtttgtggggacgcattacctagaggattacgattggttc
ttcatcggaggggatgatttattcgtattgcctcataatttgaagacttatctggcatca
ctgacgcagaaagacgggactgatccaaagacgaaggaatactttgttggaaggagattc
aattcgggtggtaccaatggatacttcaatagtggtggagcgggatattcattgtctcag
gctacgttgcgaaagttctttgccaacatcgaggatgctcagcattgttctgccaaatca
catacttcgatggaagatgtaatgattgcacgttgcttgagttacctagggattcacttt
actgacactcgagatgctaggggcagggaacgtttccatccatttgcaccgggatcgcat
ttgcattggtctccaccgggaccaggaaaacctcgggattggtacgaggattacaacaag
gaatggggcattctgacgggtacagattgttgtgctccggatagtgtgagcttccattac
attaagaaggcgagtatggtgcggcatatgcaatcgttgctgtacttt
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