Thalassiosira pseudonana: THAPSDRAFT_261325
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Entry
THAPSDRAFT_261325 CDS
T01078
Name
(RefSeq) hypothetical protein
KO
K08332
vacuolar protein 8
Organism
tps
Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tps04131
]
THAPSDRAFT_261325
03029 Mitochondrial biogenesis [BR:
tps03029
]
THAPSDRAFT_261325
Membrane trafficking [BR:
tps04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Other Cvt associated proteins
THAPSDRAFT_261325
Other autophagy associated proteins
Micronucleophagy
THAPSDRAFT_261325
Mitochondrial biogenesis [BR:
tps03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
THAPSDRAFT_261325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
Arm_2
HEAT_EZ
HEAT
HEAT_2
Cnd1
DUF383
KAP
Motif
Other DBs
NCBI-GeneID:
7450216
NCBI-ProteinID:
XP_002287772
JGI:
261325
UniProt:
B8BU38
LinkDB
All DBs
Position
2:complement(775585..777249)
Genome browser
AA seq
387 aa
AA seq
DB search
IKMEAARALSLLSSAPENIVAFDKKVLPSVIVLLQCEEEETGRDGAATISNAASNAGVRA
FVGKLGGVPPLIGLLDSPHKSCQTNACRALCQLSLLEENKLLVFHHDGLSPLIQLCSSAS
QSHAAMILCNLTSHDGTQDHVARQFDLLLFVELMNDASVECQAYATMAICNLASKQTHGS
AIMMAGGGGLQAAVLALKDEDPTTMRFACICLANMANDSTTQSQIVVHGGLPSLVSLSVV
EDNETRDCALMCLSNLAANESNHSPLMKQGVLKGFVDASASDNLHAQCLALSSIRRLSLL
RDNQERLVMEGIVQILVNSCKTTIMPDIQREIASCFCNLTLTPDHRLDITRVAISELVGL
TKSDNLDTVRLSLCAMGNLAEDVDTHT
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
attaaaatggaggcggctcgagctctttcgctgctttcaagtgcacctgagaatattgta
gcttttgacaagaaagtgctgccctcagttatcgttctacttcaatgtgaagaagaggag
actggccgagatggtgctgcgacgattagcaatgctgcttccaatgccggggtaagagcg
ttcgtgggaaagcttggtggcgttcctccgctgattggtttacttgattcgcctcacaag
agctgtcaaacaaatgcttgcagggctttgtgtcaattgtcgttgctcgaggagaataaa
ctcttagtgtttcaccatgacggactgtcgccacttatacagttgtgcagttcagccagt
caatcccatgcagcaatgattctgtgcaacttgacgtcgcacgatggcacccaggatcac
gtcgcgaggcagtttgacttgcttctctttgttgaattaatgaatgacgctagtgtggaa
tgtcaagcatacgctaccatggcgatttgcaacttggcttcaaaacagacgcatggatcg
gccatcatgatggctggaggtggtggtttgcaggctgccgtgttggcactaaaagacgaa
gatccaactacgatgcgatttgcatgtatctgtttagcaaatatggcaaacgacagtacc
actcaatctcaaatcgttgtccacggtggtctcccatcacttgtatctctttcagttgtg
gaagacaacgagactcgagactgtgccttaatgtgcctgtccaacttggcagcaaacgag
tccaatcactcacctttgatgaagcaaggggtcttgaagggctttgtggatgcctcagca
tcagacaatctacacgcacaatgcttggctctctcctctatccggcgattatcactccta
cgtgacaatcaggaaaggctggtaatggagggtattgttcagattctagtcaattcatgc
aaaactacaataatgccggacattcaacgtgaaattgcatcgtgcttttgcaatttgacc
ttgactccagaccatcggttggatataacacgagttgctatttctgagctcgtaggtttg
accaaaagcgataaccttgataccgtccgactgagtctatgtgcgatggggaatctggcc
gaggatgttgatactcacact
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