Thalassiosira pseudonana: THAPSDRAFT_261516
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Entry
THAPSDRAFT_261516 CDS
T01078
Name
(RefSeq) ArfGAP
KO
K12489
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
tps
Thalassiosira pseudonana
Pathway
tps04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
THAPSDRAFT_261516
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tps04131
]
THAPSDRAFT_261516
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tps04147
]
THAPSDRAFT_261516
Membrane trafficking [BR:
tps04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
THAPSDRAFT_261516
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
THAPSDRAFT_261516
Exosome [BR:
tps04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
THAPSDRAFT_261516
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ArfGap
PH
PH_11
Zn_Ribbon_TF
Motif
Other DBs
NCBI-GeneID:
7452329
NCBI-ProteinID:
XP_002288010
JGI:
261516
UniProt:
B8BVF6
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Position
2:complement(1933123..1934236)
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AA seq
259 aa
AA seq
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SGVIVEGWLYKKSSNRLSLNAWTRRWFILDKNGVYYLKDFMERVKVCDILLCTVREINSK
AKGNSNLRWCFEIISPNSKSYMLQACGPNDFKMWVGGIRSCIGKITPRKFGRNGARGGTQ
TESISFDEGGDAEGNASGHGGARLALFDNDFVCADCGNVDPDWASLNLGVVLCIECSGVH
RSLGVHVSKVRSLRLDTISEFEYKLLLELGNDKVNQIWEAGLHHQKGWTKPKGGATRRVK
EEWIKSKYLWKGFVEYLPE
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
tcgggtgtcatcgtcgagggatggctttataagaagagttcaaatagactgtctttgaat
gcatggacgcggcgttggtttatccttgacaagaatggggtgtactatcttaaagacttt
atggagcgcgttaaagtttgcgacattctactgtgcacagtgagggaaatcaacagtaaa
gcaaagggcaattcaaatttaaggtggtgctttgagatcattagcccaaacagcaaatcc
tacatgcttcaggcttgtggtccgaatgatttcaagatgtgggttggtggtatccgttcg
tgtattggtaagatcactccacggaagtttgggcgtaacggagccaggggagggactcaa
acggagtccatatcgtttgatgagggtggtgatgcagaaggcaatgcttctggtcacggg
ggtgctcgtttagcgctattcgacaacgacttcgtgtgtgctgattgtggtaacgttgat
ccagactgggcatctctcaacctcggtgttgtcttatgtattgagtgcagcggagttcac
cgaagccttggtgtacatgtcagcaaggttcgttctcttcggctggatactataagtgag
tttgagtacaaactgctactcgagcttggtaacgacaaagtaaatcagatatgggaagct
ggactgcatcaccagaagggttggacaaagcccaagggcggggcaacgagaagggtgaaa
gaagagtggattaagagcaaatacctctggaaaggcttcgttgaatatttacccgag
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