Thalassiosira pseudonana: THAPSDRAFT_261541
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Entry
THAPSDRAFT_261541 CDS
T01078
Name
(RefSeq) ribonuceoprotein
KO
K13207
CUG-BP- and ETR3-like factor
Organism
tps
Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tps03041
]
THAPSDRAFT_261541
Spliceosome [BR:
tps03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
THAPSDRAFT_261541
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_5
Motif
Other DBs
NCBI-GeneID:
7452352
NCBI-ProteinID:
XP_002288032
JGI:
261541
UniProt:
B8BVK1
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All DBs
Position
2:complement(2058764..2060187)
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AA seq
356 aa
AA seq
DB search
PLKLFVGQVPKTLAEEDLALLFEPYGRILDMTVIRDRRTGTHRGCAFVTYESGEDAMRVV
NEMHGKYRFEGAMWPAQVRPAQGEIEEGDDERDEGDEMAKLFVGQLPREADEDFVRELFT
SYGDITGIYIIKKRNNEAKNGCAFVKFRERDMAQAAIDALDGEVHLEGVDKPIRVKFADQ
NKGQYHHRSMSGGGSRHPGHGVIPQAHDIYMNHRGHVVGAAPGYYMGHPPGSMSPVYPSP
DEYSQHAHDGTPPAAMMTPGVHPPPLMVPARPREGPAGANLFIYHLPIDLTDADLATAFN
PFGHVISAKVYVDRYTGESKGFGFVSYDSVMAAELAIEQMNGFQIGNKRLKVQHKR
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
ccactcaaactcttcgtaggccaagtgcccaaaacgcttgctgaggaagatctagccctt
ctctttgaaccctacggccgcatcctcgacatgactgtgatccgagatcgccgtacgggg
actcatcgtggatgtgcctttgtgacgtatgagagtggagaggatgccatgagggtggta
aatgagatgcatgggaagtataggtttgagggggctatgtggcctgcacaggttaggccg
gctcagggggagattgaggaaggtgacgacgagagggatgagggggatgaaatggcgaag
ctatttgtaggtcaactgcccagggaagcagacgaagatttcgtacgcgaactatttacc
tcctacggagatatcaccggcatttacatcatcaaaaagaggaacaacgaggccaagaac
ggatgtgcctttgtcaagtttagggaacgtgatatggctcaagctgccattgatgcattg
gatggagaagtgcatttggagggggtcgacaagcctatcagggtcaagtttgcggatcag
aataaagggcaatatcatcataggtccatgtctggaggtggaagtaggcacccgggtcac
ggagttatccctcaagctcacgatatctacatgaatcacagagggcatgttgttggagct
gctcctggatactacatggggcatcctcctggatctatgtctccagtttacccttcaccg
gatgaatactctcagcatgctcatgatggcactccaccagctgcgatgatgactcctgga
gtgcaccctcctcctttgatggtccctgccaggcctcgtgagggacctgctggtgccaat
cttttcatctaccatcttcccattgatcttacggatgctgatcttgccactgcctttaat
ccatttgggcatgttattagtgccaaagtgtacgttgaccgttacaccggcgaatctaaa
ggatttggctttgtctcttacgactctgtcatggctgctgaacttgccattgaacaaatg
aatggattccaaattggaaacaagaggctcaaagtacagcacaagcgt
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