KEGG   Thalassiosira pseudonana: THAPSDRAFT_261635
Entry
THAPSDRAFT_261635 CDS       T01078                                 
Symbol
pcna
Name
(RefSeq) pcna-like protein
  KO
K04802  proliferating cell nuclear antigen
Organism
tps  Thalassiosira pseudonana
Pathway
tps03030  DNA replication
tps03410  Base excision repair
tps03420  Nucleotide excision repair
tps03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:tps00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    THAPSDRAFT_261635 (pcna)
   03410 Base excision repair
    THAPSDRAFT_261635 (pcna)
   03420 Nucleotide excision repair
    THAPSDRAFT_261635 (pcna)
   03430 Mismatch repair
    THAPSDRAFT_261635 (pcna)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tps03032]
    THAPSDRAFT_261635 (pcna)
   03400 DNA repair and recombination proteins [BR:tps03400]
    THAPSDRAFT_261635 (pcna)
DNA replication proteins [BR:tps03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    THAPSDRAFT_261635 (pcna)
DNA repair and recombination proteins [BR:tps03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     THAPSDRAFT_261635 (pcna)
   MMR (mismatch excision repair)
    Other MMR factors
     THAPSDRAFT_261635 (pcna)
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    THAPSDRAFT_261635 (pcna)
SSDB
Motif
Pfam: PCNA_C PCNA_N Rad1 Hus1 Rad9
Other DBs
NCBI-GeneID: 7452799
NCBI-ProteinID: XP_002288154
JGI: 261635
UniProt: B8BWU2
LinkDB
Position
3:133281..134163
AA seq 261 aa
MFEARLTQGKVFKQLIEALKDLVQEANIDCTDDEISIQAMDNSHVSLVAVSLRSGGFDHF
RCDRPISLGFNAANMGKILKCAGNDDVITLRAEDEGDSLALVFESPGQDRIADFELKLMD
IDNEQLGIPDTEYKCTIQMPSAEFQRIIRDLQVLGDTCTISCTKEGVKFSVSGDLGSGNV
LVRQNSAAEKDEEKVMIEMDEPVELTFALRYLNFFTKATSLGPTVILSMSPEVPVVVEYP
IGETGHIKYYLAPKIDEDEED
NT seq 786 nt   +upstreamnt  +downstreamnt
atgttcgaagcacgcctcacccaaggaaaagtcttcaaacagctaatcgaagccctgaag
gacctagtccaagaagccaacatagactgcaccgacgatgaaatctccatccaagcaatg
gacaactcccacgtgtccctcgtggccgtgtccctccgctcgggaggattcgatcacttt
cgatgcgatcgtcccatttcgttggggttcaatgctgcgaatatgggcaagattctgaag
tgcgcggggaatgatgatgtgatcacgctgagggcggaggacgagggggattcgttggcg
ttggtgtttgagagtcctggacaggataggattgctgattttgaactcaaactcatggac
attgacaacgaacaactcggcatccccgacaccgaatacaaatgcaccatccaaatgccc
tccgccgaattccaacgcatcatccgcgacctccaagtcctcggagacacctgcaccatc
tcctgcaccaaagagggagtcaaattctccgtttcgggcgatctcgggtcggggaacgtt
ctcgttcgtcagaatagtgctgcggagaaggatgaggagaaggttatgattgagatggat
gagccggtggagttgacgtttgcgctgaggtacctcaacttttttaccaaggcgactagt
ttgggacctacggttattttgagtatgagtccggaggtgcctgttgtggtggagtatcct
attggggagacggggcatattaagtattatttggctccaaagatcgatgaggatgaagag
gattaa

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