Thalassiosira pseudonana: THAPSDRAFT_261639
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Entry
THAPSDRAFT_261639 CDS
T01078
Symbol
Helicase_1
Name
(RefSeq) DNA helicase
KO
K11273
chromosome transmission fidelity protein 1 [EC:
5.6.2.7
]
Organism
tps
Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tps03036
]
THAPSDRAFT_261639 (Helicase_1)
Enzymes [BR:
tps01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
THAPSDRAFT_261639 (Helicase_1)
Chromosome and associated proteins [BR:
tps03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
THAPSDRAFT_261639 (Helicase_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
ResIII
DUF1601
Motif
Other DBs
NCBI-GeneID:
7442456
NCBI-ProteinID:
XP_002288162
JGI:
261639
UniProt:
B8BWV6
LinkDB
All DBs
Position
3:168078..171199
Genome browser
AA seq
839 aa
AA seq
DB search
MLESPTGTGKSLSLACASMAWLRYCEDADINELHDGCSHTISPSPMSPSNETSKSANITT
TTSTTSTKRKYDWLDSWQPSEQLISQPIISQSTKNSTNLQSNSYLTKDQQKEQVKKFAIT
NRTALNNELNGIRARLDRLINVAGVVHDKNNSKEGREENDFLVEEYHSDEECGGNKCGGV
SSDSEDDNVALIALGPRTHSQLSQFIGELRRTHWGETVKVVALGSRSLLCGNEDVLYASK
TNKKNSRRNESEITEMCLDMQKIKRDGKKKSDDGKGKKVSSCPYLASPEAVSTLAMHALV
RPSDIEDTANLGKASRVCSYYASRKALAAAEVVVLPYNTLLSPQARQSVGLSIKNALIVV
DEAHNLPEALRNISSCQLSLPVMEAAMSQLLAYTRRYSGRLAGRNLFYLGQIRKVLLAMI
KYLKRPPPASSHGSDVTKDESIRTKEMMAAVDLMFRLKLDNVNLFALLRYLEKSRLSQKL
LGFVNHTVASSEENANNTANNNDQSEFMSKHVSSLSIVETFFQRLTTTSREGKIIVEWSL
ESDDEESSFTTKPPTFRFLDNIVEEAHAVVLAGGTLRPFSHLAREYDVVHNTSGSSSASP
PSSLVQITQQLTTFTCGHVIPPSNVVTACLSFGPTSHKLDFRHNSRSSNAMIDELGRVLL
NMCNVVPSGFVVFLPSYNYESQVFQRWRSTGMLAQIDKKKRIHREPKNSRDLETALARYS
TEASSSKAGALLFSVMGGKMSEGINFANDMARCVLVVGLPYPDITDPVLKEKMQCLDREY
RKSGTGITGQSYYQNLCMRTVNQSVGRAIRHANDYAAIVLADYRYASEPRIWKGLPQWL
NT seq
2519 nt
NT seq
+upstream
nt +downstream
nt
atgcttgagagtcctacggggacgggtaaaagtttgtctctggcctgtgcctccatggct
tggttgcgttattgcgaggatgctgacatcaacgagttgcatgatggttgctcccatacg
atatctccgtctccaatgtctccgtcaaacgaaacttctaaatctgccaacatcacaaca
actacaagcaccacttctaccaagcgaaagtatgattggctcgactcgtggcagccctcc
gaacaactcatatcacaacctatcatatctcaatcaacgaagaactcaaccaatcttcaa
tctaattcatacctaaccaaagatcaacaaaaagaacaagtcaaaaaattcgcaataacc
aacagaactgcattgaacaatgaactgaatggaatacgtgctcgtttggatagattaatc
aacgttgctggagttgtccacgataagaataattcaaaggaggggagagaagagaatgat
tttctagtggaagagtatcattccgacgaagaatgtgggggaaacaagtgtgggggtgtt
tcttcggatagtgaagatgataatgttgcattgattgctcttggaccaagaactcactcc
caattatcccaatttattggtgaactacgacgaactcattggggagagacagtcaaagtg
gtggcattaggctcgcgtagtcttctctgtggcaatgaggatgtgttatatgcatctaaa
acaaacaagaagaacagtcgcaggaatgagtctgagattaccgaaatgtgcttggatatg
caaaagatcaaacgggatggaaagaagaagtcggatgatggcaaggggaagaaggtatcg
tcttgtccatatcttgcatcaccagaggcagtttctacacttgcgatgcatgcattggtg
cgcccttctgacattgaagacactgcaaatctcggcaaggcatcgcgagtatgctcgtat
tatgcatctagaaaagcacttgctgctgccgaggtagtggtactgccatacaatactctt
ctttcgcctcaagcacgtcaatcagtgggactgtctatcaagaatgctctcattgtcgtt
gatgaagctcacaatcttccagaggcattgcgtaatatctcatcgtgccagttgtctcta
ccggtgatggaggcggctatgtctcagttgttggcgtatacacgtcgatactctggacgg
ttggcaggcaggaacttgttctacttgggtcagatacgaaaagtgttgttagcaatgatc
aaatatctgaaacgtccacctcctgcgtctagccatggatcggatgttaccaaagatgag
tccattagaacgaaggagatgatggcagcagtcgacttgatgtttcggttaaaattggac
aacgtcaatctattcgcattgcttcggtatcttgagaagtctcgtctctcgcaaaagcta
ttgggattcgtcaatcacacagtagcatcgtcagaagaaaatgcaaataatacagccaac
aacaatgaccagtccgagttcatgtcaaagcacgtctcgtcactgtctattgtggagaca
ttcttccaacgattgaccaccacatctcgtgaagggaagatcatagtagagtggtcatta
gaaagcgatgatgaggagtcatcgtttacgaccaagccaccaacttttcggttccttgac
aacattgttgaagaggcacatgctgttgttttggcaggtggaacattacgtccattttct
caccttgctcgggaatacgatgtggtgcataatacctccggatcttcgtctgcttcgccc
ccttcgtcattggttcaaataacgcaacaactcacaacattcacgtgcggtcacgtcata
ccaccaagcaatgtcgtcacggcctgcttatcatttggaccaacttcgcacaagctagac
tttcgacacaactctcgttcatccaatgcaatgattgacgaacttggacgtgtactgttg
aacatgtgcaatgtcgttccatccggctttgtcgtcttccttccaagctacaactacgaa
agccaagtcttccaacgctggagatcgactgggatgctagctcagattgacaagaagaag
aggatccatcgtgagccgaagaactctcgcgatcttgagactgcattggcgagatactcc
acagaagccagttcgtccaaagctggagctctgctgttctcggtcatgggcggaaagatg
agcgagggaataaactttgccaatgacatggcgcgatgtgtgctggttgtcgggcttcct
tatcctgatatcacagatcctgtattgaaagaaaagatgcagtgtctagatcgtgagtat
cgtaagtctggaactggcatcacaggacaatcatactaccaaaacctgtgcatgaggact
gtcaatcagagtgtaggtagagctatccgtcatgccaacgattatgcagccatcgttttg
gccgattacagatatgcctctgaacctaggatttggaaaggattgcctcagtggttgag
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