Thalassiosira pseudonana: THAPSDRAFT_261692
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Entry
THAPSDRAFT_261692 CDS
T01078
Name
(RefSeq) hypothetical protein
KO
K20523
SH3 domain-containing YSC84-like protein 1
Organism
tps
Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tps04131
]
THAPSDRAFT_261692
Membrane trafficking [BR:
tps04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
THAPSDRAFT_261692
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ysc84
FYVE
DZR_2
Motif
Other DBs
NCBI-GeneID:
7441760
NCBI-ProteinID:
XP_002288208
JGI:
261692
UniProt:
B8BX48
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All DBs
Position
3:402322..403643
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AA seq
352 aa
AA seq
DB search
MSPTNTPNPDLSSPRLSSTWDPDTLQNNCSGCSQYFDPIFNRRHHCRLCGRLFCQDCSNT
RSLIPPRLEQRMLLARHPQRTCHSCRIQLAPLQEELCLRNSNAMRYNYIDEGDAVKRLCN
SPLAFTLGHEVRKAAYTLSNLLPAGRGDPTLRNLDGMSIPANLLQNAKGIAIVTACKGGL
GFAGFEIGTGLVVARRRGDDGIDLDSWTAPSAIGIAGFAWGALVGAQVSDHVFLLMTEDA
VRLFSSEDGKSIQLGADVGVALGPMGRSAEADFGATTSRSQNRMGGSGIAMAPVYTYSLS
KGLYAGVSLDGRIVMTRSRVNEKFYGRAVTAHELLSGQVPTPPAAQPLYDAL
NT seq
1055 nt
NT seq
+upstream
nt +downstream
nt
atgtcacctacaaacacaccgaatccagacctctcttccccacgcctgagctccacatgg
gatccagacacgctccaaaacaactgtagtggatgcagccaatactttgatcccatcttc
aaccgacgacaccactgccgcctctgtggacgactattctgccaagattgcagtaatacg
cgtagtttgatcccacccagattggaacaacgtatgttattggcaagacatccacaacga
acgtgccactcgtgtcgtattcaattggcaccactccaagaagagttgtgtttgaggaac
agcaacgccatgagatacaactacatcgatgagggagatgcagtaaaacgactttgcaat
tcaccattggcattcacgttgggtcacgaagttagaaaagcagcctatacactcagcaat
ctactaccagctggaagaggtgatccgacgctacgaaatcttgatggaatgagcattcct
gcgaatcttcttcaaaatgcaaaaggtatcgcgatagtcacggcttgcaagggcggactt
ggattcgctggatttgagattggtacgggattggtagtggcacgaagacgaggagacgat
gggatagatttagactcgtggactgctccatctgccattggcattgctggatttgcatgg
ggtgcattggtgggagctcaagtgtcggatcatgtttttctcctaatgacggaagatgca
gtgagattgttctctagtgaggatggaaagtcaattcagttgggtgccgacgtgggagtt
gcgttggggccaatggggagaagtgccgaagcagattttggagcaacaacttcacgttca
cagaatagaatgggcggatcgggtattgcaatggcaccagtgtacacgtactctctatca
aaaggcctttatgctggagtatccttagacggaaggattgtcatgactcgttcaagagta
aacgaaaagttctacggaagagcagtgacggctcatgaattgctttcaggccaagtgcct
actcctccagcagcacagccgctctacgatgctct
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