Thalassiosira pseudonana: THAPSDRAFT_262047
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Entry
THAPSDRAFT_262047 CDS
T01078
Name
(RefSeq) ubiquitin activating enzyme
KO
K03178
ubiquitin-activating enzyme E1 [EC:
6.2.1.45
]
Organism
tps
Thalassiosira pseudonana
Pathway
tps04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
THAPSDRAFT_262047
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tps04121
]
THAPSDRAFT_262047
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tps04147
]
THAPSDRAFT_262047
Enzymes [BR:
tps01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.45 E1 ubiquitin-activating enzyme
THAPSDRAFT_262047
Ubiquitin system [BR:
tps04121
]
Ubiquitin-activating enzymes (E1)
Ubiquitin activating enzyme
THAPSDRAFT_262047
Exosome [BR:
tps04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
THAPSDRAFT_262047
Exosomal proteins of other body fluids (saliva and urine)
THAPSDRAFT_262047
Exosomal proteins of colorectal cancer cells
THAPSDRAFT_262047
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ThiF
UBA_E1_SCCH
E1_UFD
BilD_C
Motif
Other DBs
NCBI-GeneID:
7446757
NCBI-ProteinID:
XP_002289167
JGI:
262047
UniProt:
B8C120
LinkDB
All DBs
Position
4:<290752..>294296
Genome browser
AA seq
977 aa
AA seq
DB search
DEERYSRQMYALGARAHGLVRSTTAILDVPSGLLYEIAKNLALSGVGRIILVRDDNNTDD
GYFDGDLDDLGGAYRRAALAEIIPGSSNQHDKSNNNDVSEDHVALGSNPVVVCVDRSISA
QLEMNDACRNSTSSVPFVSVETAGVYSRIFCDFGPSFVVVDEDGETPRSTLMEKVEILAG
DDGTEQHFTVHCLEGERHDVSRGNVIEFQGDYSQDGVRTATFPQCEVSPSSKATLDSLLE
GEARSFSRIKLPRTIAFTSLRDILHPPFDPSRRKAVMSSMAALDLFVKKYGRLPLQSNAS
NGSGSKSKRTDVERFQSLVRKTTKVEISETWDTMISQFARTCRAKFTPVQAFSGALGAQE
VLKGATKLYNPVHQFLLYDCDEVLQNNDGNARFEDDAFEPIARGQSYILGNELSRKLALS
RIFLVGAGAIGCELLKNLAAMGAGTGSSNTNQGCLIITDMDTIERSNLSRQLLFRDHDVG
EFKSAAARTAVLRFLPDCRIEAHTSRVGEEEDGPFDDDFWSSGCSVVLNALDNVEARLFV
DSQCVAHGLGLIDAGTLGPKGNVQVVIPHQSESYGSSADPPEPDIPVCTLKNFPYEISHT
IQWARDLFDGYFHRRPRQANDHLGEDAALDMAEELGEDLGVFPFVVGELDSNDPEYKVCL
AWAIKQAHRLFFVAMDELVQKHPIDSVDDDGALFWSGTRRAPKPFRFVSLNSDADEFVKA
AARLRMESFLPVDSAEGTSALVSLEDALTSLEGHYTRLQSKDNHILRNLSGGDGSSTLDM
VLEKLNGAKTGASFMPSLNLADFEKDDDNNGHVAFVTAASNLRALSYGIKPADTMETRRV
AGRIVPAMITTTGLVSALSCLEFVKMLKGLPLNMHRNAFVNMALPFFAFTAPLPAEEVAG
VNRSSHTIWDRVIVKGSSKSPVGAMTLRTFLDKVKRSSGFGDDFEVANLSYGPFMIYANF
LHSEDDELLDAPLLDTV
NT seq
2930 nt
NT seq
+upstream
nt +downstream
nt
gacgaagaacgctactcacgacaaatgtatgcactcggagcacgtgctcatggattggta
cgttccactaccgccattttggatgttccatctggtctattgtatgaaattgcaaagaat
ctagcattgagtggagtaggacgtatcattctagttcgtgacgataataataccgacgat
ggatactttgatggtgatttggatgaccttgggggtgcctatcgccgagcagctttggct
gagattattccagggagcagcaatcaacacgacaaaagcaacaacaatgacgtgtcggaa
gatcacgttgcacttggttccaatccagttgtggtatgcgttgatagatctatatcagca
caattggaaatgaatgatgcttgtcgaaattcaacttcgtcagttccttttgtatcagta
gagactgcgggagtgtactcgcgaatcttttgcgattttggaccttcgtttgtggtggtt
gatgaagacggtgaaacaccacgatcgacattgatggagaaggttgagatattggctggc
gatgacggaacagagcaacattttactgtccattgtcttgagggagaacggcacgatgtc
tcgcgtggaaacgtcattgaatttcaaggggattacagccaagatggagtcagaactgcg
acttttccacaatgcgaggtgagcccctcgtcaaaggcaacgctagattcattactggag
ggagaagcacgttctttctctcgtatcaagcttcccaggacaatagcattcacgtcattg
cgagatatcttacatcccccctttgatccgtcacgacgtaaggcagtaatgtcatcaatg
gcggcgttggacctgtttgtaaaaaagtatggcaggcttcctttacaatcaaatgcatcc
aatggcagtggatccaaatcaaaacgaacggatgtggagcgatttcaatctctagtgcgg
aagacaaccaaagtggaaatttcagaaacgtgggataccatgatttcacaattcgctaga
acatgccgtgctaagtttacacctgttcaggcattctcgggagccctgggagcacaagaa
gtgcttaaaggagccactaaactgtacaatccagttcaccagttcttactgtacgattgc
gacgaagtgcttcagaacaatgatggtaacgctaggtttgaggatgatgcttttgaacca
attgcacgaggccagtcgtatatccttgggaatgaactgtcgagaaagcttgcactgtcg
cggatattcctagttggagccggtgcaatcgggtgcgagttgctcaagaatcttgcagcc
atgggagctggaaccggaagtagcaacaccaatcagggttgtctcattattacagacatg
gataccattgaacggtccaatcttagccgacagcttctctttagagatcatgacgtcgga
gagttcaaaagtgctgcagctcgtacagctgtccttcgctttcttccagattgtcgcata
gaagcacacactagccgtgtaggagaggaggaggatgggccctttgatgacgacttttgg
tcttctggatgcagtgtcgttctcaatgcattagacaatgtggaggcgcgactgtttgta
gacagtcaatgcgtggctcatggattaggtctcattgatgctggtacgctgggaccaaag
ggcaacgtccaagtagttatccctcaccaaagtgaatcgtacggctcatcggcagatccg
cctgagccagacattcctgtttgcactctcaagaacttcccatacgaaatcagtcataca
attcagtgggccagagatctgtttgatggatacttccaccggcgaccacggcaggcaaac
gatcatctgggagaagatgcagcgttagacatggcagaggagctgggagaggatcttggc
gtctttccatttgtcgtgggagaattggactctaatgatccagagtataaagtgtgtttg
gcgtgggcaattaaacaagcacacagattgttcttcgtggcgatggatgagcttgttcaa
aaacatcccattgacagtgttgacgatgacggagctctgttttggtcgggaacgagacgt
gctcccaagccatttagattcgtatcactgaattcagacgcagatgaatttgtcaaagct
gctgccagactgagaatggaatcgtttctaccagtggactccgcggaaggaacatctgca
ttggtgtcactggaagatgcattgacttcgttggaagggcattacaccaggctgcagagc
aaagacaaccatatattgcgaaacctttctggtggtgacggcagcagtacgctggatatg
gtattggagaagttgaacggcgccaaaactggtgcctctttcatgccgagcttgaacctt
gctgactttgaaaaggatgatgataacaacggacacgttgcatttgttacagctgcaagc
aacttacgtgcgttgtcatacggcatcaagccggctgatacaatggagacccgacgcgtt
gctggaagaattgtgcctgcgatgataacaactactggtcttgtgtcggcattgtcgtgc
cttgagtttgttaagatgttgaagggtctgcctttgaacatgcatcgcaatgcctttgtc
aatatggctctcccgttcttcgcttttacagcaccgttgccagctgaagaagttgcggga
gtaaacagaagttcacatacaatatgggatagagtgattgtcaaaggaagcagcaaatcg
ccagtcggcgccatgacactgagaacgtttctagacaaagtaaagaggtcttctgggttt
ggggatgactttgaggttgcaaatctatcctatggtcccttcatgatatatgcaaacttc
ctacacagcgaagatgatgaacttctggatgctcctctcttggacacagt
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