Thalassiosira pseudonana: THAPSDRAFT_262207
Help
Entry
THAPSDRAFT_262207 CDS
T01078
Name
(RefSeq) serine/threonine deaminase
KO
K17989
L-serine/L-threonine ammonia-lyase [EC:
4.3.1.17
4.3.1.19
]
Organism
tps
Thalassiosira pseudonana
Pathway
tps00260
Glycine, serine and threonine metabolism
tps00270
Cysteine and methionine metabolism
tps00290
Valine, leucine and isoleucine biosynthesis
tps01100
Metabolic pathways
tps01110
Biosynthesis of secondary metabolites
tps01200
Carbon metabolism
tps01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
THAPSDRAFT_262207
00270 Cysteine and methionine metabolism
THAPSDRAFT_262207
00290 Valine, leucine and isoleucine biosynthesis
THAPSDRAFT_262207
Enzymes [BR:
tps01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.1 Ammonia-lyases
4.3.1.17 L-serine ammonia-lyase
THAPSDRAFT_262207
4.3.1.19 threonine ammonia-lyase
THAPSDRAFT_262207
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALP
Motif
Other DBs
NCBI-GeneID:
7446127
NCBI-ProteinID:
XP_002289376
JGI:
262207
UniProt:
B8BZN7
LinkDB
All DBs
Position
4:1374224..1375468
Genome browser
AA seq
374 aa
AA seq
DB search
FLTTPLIHSIPLSNLCAPHQVYLKLDLLQPSGSFKDRGMAHLCMTLKKVHTANRKQKQQL
SPGGQDDGSGNTMKLISSSGGNAGLAVTTVARNIPDMEVSVIVPETTKPLVIEKLRSLGA
DVTVHGANWNLADDLARKLVKEHRDQDGDSALSGGAEYVSPYDNPLLWTGHSTVVDEIIT
QLIDTKHDVKVGAILASVGGGGLLCGILEGLERNYFGGSSVRSNVISGTKVVACETEGAA
SFAASKKGTTMVRLEGINSVATSLGALEVTPAVIHRSRRHQERGQIGGSGEDVLSYVCTD
AEAVNACVQFSSHHRMLVEPACGAALAPLYSDRLRTKLLEELKSKGEESSAIVVEVCGGS
GVNLDLLEGWKKQF
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
ttcttaaccacacctctcatccattccattccgctatctaacttgtgtgctccacatcaa
gtatacctcaagttggatttgcttcaaccgagcggcagcttcaaagatcgtggtatggct
catctttgtatgactttgaagaaagtgcacactgctaatcgtaagcaaaagcaacaactc
tcacctggtggccaagacgatggatcggggaatacgatgaaactgatttcatcctcgggt
ggaaacgctggcctggccgtaaccacagttgctcgaaacataccagatatggaggtatca
gttatcgtccccgaaactacaaaaccactggttattgaaaagttgcgttctttgggagct
gatgtgactgtacacggagctaattggaaccttgctgatgatttggcaagaaagctggta
aaggaacatcgagatcaggatggggattcagcattgtcgggaggggcagagtatgtttcg
ccgtatgacaatcctttactgtggacaggacattccactgtggtagatgaaatcatcaca
cagctcattgatacgaagcatgacgtgaaagtgggagccatacttgcctctgttggggga
ggaggtcttctttgtggaatcttggaaggactggaacgcaactacttcggcggaagcagc
gtacgatccaatgttatcagcggaacaaaggttgtcgcttgtgagacggaaggtgctgct
tcgtttgcagcttcaaaaaaaggcacgacaatggttcgtttggagggcatcaactctgta
gctacaagtcttggagctctggaggttactcctgccgtcattcatcgctctcgtcgacac
caagaacgaggacaaattggtgggagcggcgaagatgttctttcatacgtgtgtactgat
gccgaggcagtgaatgcgtgtgtgcaattctcgtcacatcatcgaatgttggtggaacca
gcttgtggagctgcattggcaccgttgtattctgataggttgcgtacgaagctgctggag
gaactgaaaagcaaaggtgaagagagcagtgcaattgttgtggaggtatgtggcggaagt
ggtgtcaatctagacttactggaggggtggaagaagcaattt
DBGET
integrated database retrieval system