Thalassiosira pseudonana: THAPSDRAFT_262303
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Entry
THAPSDRAFT_262303 CDS
T01078
Symbol
Helicase_2
Name
(RefSeq) UVRD/Rep like helicase
Organism
tps
Thalassiosira pseudonana
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_11
UvrD_C_2
YtzH
Motif
Other DBs
NCBI-GeneID:
7451348
NCBI-ProteinID:
XP_002289958
JGI:
262303
UniProt:
B8C0C4
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Position
4:complement(1965051..1967701)
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AA seq
698 aa
AA seq
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MPFTSSSNHIFQHHSIRHYGYSYPLYSSTKSTVQGGETILSTADDVPPEQSSIITEGLNP
SQMEATLRPRYSITRVIAGPGAGKTKVLTCRIAHLLLSCESEGAGHANGIHSSYLYREGI
LAVTFTKKAAMEMERRLTELVATSTQQLPVEQTTVGTFHSVCSKILRKNQFVQTLDGSFN
ILDQSDQLRILKDVLKEHHIELKSSSAGGGGRNDDIRPITVLNAISLMNTELAILSTPHN
SIKKDDEDSSKKMSRKVRQIVTQIRVPFQKVKYSQNSVDFDDLILLTRELLLNHPEVREI
LHRRWRHILVDEFQDTSQVQLDLVRLLTTNSLFVVGDGDQSIYSWRGASPESMSDFEVAF
HDQMHVKSVYLMENYRSTTNIVKAAQKVISTSDGHRGSQNKDSDASAQDTKFVVTSVNSM
IESGDLTPSSTVAMIYRTNAQSRLIEEACVEQNLRYVVRGSSGTFYKRAEIQDCMCFLKI
MYNGRDRSAWARAVKAPSRGIGDTSLEEFFRYCDAITDKYTEISNDGSSPPTPMDVMMSL
ARSNSGEEKDIGMLIPPKDFLSTRSLNRFIPFASSLYSLREKAKVQSVNEFLLSVIDDLM
LKTHFDAISKTRDEYEDRLSNVMELIRAADRYKDDGPCIVGDLNGETVETALGNFLDDVA
LIADIAPDDAEVEGSGGRVVANLMTIHSSKGMEFDAVL
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgccgtttacctcaagttcgaatcatatctttcaacatcacagcatacggcattatggt
tattcctatccattgtactcttcgacaaaatcaacagtacaaggcggcgaaactatactc
tctacagccgacgacgtgccacctgaacagtcatccatcattactgaagggctgaatcct
tcacaaatggaagctacactacgtccacgctactccataacacgtgttattgcaggccct
ggtgccggtaaaacaaaagtgctcacgtgcagaattgctcatttgctcctttcttgtgag
agtgaaggtgcgggtcatgccaacggtattcactcaagctatctttatcgggaggggata
ttggcagtgacgtttaccaagaaggctgcaatggaaatggaaagacgattgactgagttg
gtggcgacttcaactcaacaactgccggtggaacaaaccacagtaggaacctttcactca
gtgtgctcaaagatacttcgaaagaatcagtttgttcagacgttggatggctcgtttaat
attcttgatcaatcggatcagttgcgtatactgaaagatgtactcaaagaacatcacatt
gagctcaagtcgtcatcagcaggaggaggtggaagaaatgatgatatacgtccaatcact
gtgctgaatgctatatctttgatgaataccgagctagccattttgagcactccacacaac
agtattaagaaggatgatgaagattcttcaaagaagatgagtcgcaaagttcgtcagatt
gtaacacagattcgcgtcccctttcaaaaggtcaagtattcacaaaactcggttgacttt
gatgatctcattttgctgacgagggaactactgctgaatcatccagaggttagggagata
cttcatagacgttggagacacattcttgttgacgagttccaagacacatctcaggtacag
cttgacttggtgcgtctcttgacaacaaatagcttgtttgtagttggcgatggagatcag
agtatctacagttggagaggtgcaagtcctgaaagtatgtctgactttgaggttgcgttt
catgatcaaatgcacgtcaagtcagtatatcttatggagaactacagatccactacaaat
attgttaaagctgctcagaaagtcatttctacctcagatggacacagaggctctcaaaac
aaagatagtgatgcttctgctcaggatacaaaatttgtagtcacatccgtcaactcaatg
attgagagtggagatctcacaccatcgtccactgtggccatgatttatcgtaccaacgca
caatctcgtctcattgaagaagcatgcgtggaacagaatcttcgttacgtcgtacgagga
tcatcgggtacattttataaacgagctgagattcaggactgcatgtgctttctaaagatc
atgtataatggtcgtgatagatctgcgtgggctcgagcagtgaaagcaccgagtagaggc
attggagatacatcgctggaggagttctttcgatattgtgatgctattacagacaaatac
acggaaatatcaaatgatggaagtagccctccaacaccaatggatgtaatgatgtcactc
gctcgtagcaacagtggtgaagaaaaggacattggtatgcttattccacccaaagacttt
ctgtctacacgatctttaaatcggttcataccgtttgcatctagcttatactccttaaga
gaaaaggcgaaggttcaatctgtgaatgagtttctgttatcagtgatcgacgatctcatg
ctcaagacacattttgatgcaatatcaaagactcgtgatgagtacgaggatcgccttagc
aatgtaatggagttgatcagagcagcagataggtacaaagatgatggcccttgtattgtt
ggcgacttgaatggtgaaactgtcgaaactgcccttggcaacttcttggatgacgttgct
cttattgcagacattgctccagacgatgctgaagttgaaggcagcggaggtagagttgtg
gcaaatctcatgacaattcactcgtccaaaggaatggagtttgatgcggtattgtga
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