Thalassiosira pseudonana: THAPSDRAFT_26239
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Entry
THAPSDRAFT_26239 CDS
T01078
Symbol
RPN1
Name
(RefSeq) 26S proteasome regulatory subunit RPN1 2
KO
K03028
26S proteasome regulatory subunit N1
Organism
tps
Thalassiosira pseudonana
Pathway
tps03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
THAPSDRAFT_26239 (RPN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
tps03051
]
THAPSDRAFT_26239 (RPN1)
Proteasome [BR:
tps03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
non-ATPase subunits
THAPSDRAFT_26239 (RPN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPN1_RPN2_N
RPN1_C
PC_rep
HEAT_2
TPR_15
FAP206
Motif
Other DBs
NCBI-GeneID:
7449697
NCBI-ProteinID:
XP_002290125
JGI:
26239
UniProt:
B8C241
LinkDB
All DBs
Position
5:472145..475341
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AA seq
903 aa
AA seq
DB search
MAPKSNDKPVELTASTTKPKDSKKKTKSKGGESDIVEEENALSEEDRALKERLETCISTL
LNTANESSVTIPIRLTALNVICDELKSATSSMTSVPKPLKFLRPKYDVLKEYYGGLLAEK
EMGEEDLVLRARLADVLAVLAMTLGKHGSWGHEFVRSLAGEIGQEYNSRILAGSDPDTDE
PFADLLGMVDEIVPFNIAHNAEAEAVDLLIEVQRLKKILDLNEGVDEKNYRRICLYLIKT
ADFMSDPDDYAEVLETAYELFRKQNQYFDALRIALRMGNEEAIPELFSQCTSDKLMTKQM
CLLLARQRINYVVESTDDGDEDMLNEIIGNENLSEEFLKVAQDLDVMDAKTPEDIYKSHL
AETGGFSRRKDAGGAVVDSARANLASTYVNAFVNAGFGQDKLMTPDNDWLYKNKDHGMMA
ASASLGLIQLWNVEEGLAQIDKFLYSSEEYVKAGAALAVGILSSGVRNDADPTIALLDEH
INGDSHIMKCAACTGLGIAYAGSAREDVMELILPLVEQENSGPTTMLEVSLAGLALGMIY
VGKCDDAVGGTIVQRLMEATDEELDHSHAKFLCLGLGLLFLGRMEKAEAMLEALRTIEHK
ISKLAVVVLETCAYAGSGNVLKVQEMLHQCAEHLEEDAEHQMAAVIGIGLITMGEEVGAE
MALRSFEHLLHYCELPVKRAVPLALGVLNISNPDFSVIDQLSRLSHDPDAEISQNAIMAM
GLVSAGTNNSRVAGLMRQLSEFYSKEAGHVFCVRIAQAMLHMGKGLMTLAPMHSDRLITS
GPALGGVLTLLFSCMDLKNTLLDKTHYLLYYLTCAMNPRMLITVNEDLSWRPVTVRVGQA
VETVGQAGKPKTITGFQTHTTPVLISTLERAELGTEEVLSVSSVLEGIVIVKDNPDYEVP
EST
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atggcacccaaatccaacgacaagcccgtcgaactaaccgcctccaccaccaaacccaaa
gactccaaaaagaaaaccaagtccaaaggcggtgaatctgacattgtcgaagaagaaaac
gccctctccgaagaagaccgcgccctcaaagaacgtctagaaacatgcatctctaccctc
ctcaacactgccaatgaatcatcggtgacgatccccattcgacttaccgccctcaatgtc
atttgtgacgagttgaagagtgccacgagtagtatgacgagtgttcccaagcctttgaag
tttttgaggccaaagtatgatgtgttgaaggagtattatgggggcttgttggcggaaaag
gagatgggagaggaggatttggtgttgagggcgagattggcggatgtgttggctgtgttg
gccatgactcttgggaagcatggatcctggggacacgaattcgtccgctcccttgccgga
gaaatcggtcaagaatacaactcccgcatcctcgccggatccgatcccgacacggacgag
ccattcgccgatttactaggcatggtggatgaaattgttccttttaatattgctcataat
gctgaggcggaggcggtggatttgttgattgaggtgcagaggttgaagaagattttggat
ttgaatgagggggtggatgagaagaattataggaggatttgtttgtatttgattaagact
gcggattttatgagtgatcctgatgattatgcggaggtactcgaaacagcatacgaacta
ttccgcaaacaaaatcaatactttgacgccctccgcatcgcccttcgcatgggcaacgaa
gaagccatccccgaactcttctcccaatgcacctccgacaaactaatgaccaaacaaatg
tgcctcctcctagctcgtcaacgtatcaactacgttgtcgaatccaccgacgatggagac
gaagacatgctcaatgaaatcattgggaatgaaaatctctcggaggaatttttgaaggtg
gcgcaagatttggatgtgatggatgcaaagactccggaggatatttataagagtcatttg
gcggagactgggggatttagtaggaggaaggacgcgggtggggcggtggtggattcggct
agggcgaacttggctagtacgtatgtgaatgcttttgtgaatgctgggtttggacaggat
aagctcatgactcccgacaatgattggttgtataagaacaaagatcacggtatgatggca
gcctcagcatccctgggtttaattcagctctggaacgtggaagagggacttgcacagatt
gacaaattcttgtactcttccgaggaatacgtaaaggctggagctgcattggctgttgga
attctcagtagtggggtacgcaatgacgccgatcctaccattgccttgttggatgaacac
attaatggcgactcccacattatgaagtgtgctgcttgcactggacttgggattgcttac
gctggatctgcgagggaagatgttatggagttaattcttcctctcgtcgagcaggagaac
tctggacccaccacaatgctcgaggtatctctcgccggacttgctcttggtatgatttat
gttgggaagtgcgacgacgcagtcggtggtactattgtacagaggctcatggaggcaacg
gatgaggagctcgatcactcacacgccaaattcctctgtcttgggcttggccttcttttc
cttgggcgtatggagaaggcagaggccatgttggaggcactgcgaacaattgaacacaaa
atctccaagctggctgtcgttgtattggagacgtgtgcgtatgctggtagtggcaacgtg
ctaaaggtgcaggagatgcttcatcagtgtgcagagcacctcgaggaggatgcagagcac
caaatggctgcagtgattggaattggacttatcaccatgggagaggaagtgggagcagag
atggcacttcgttcctttgagcacttgcttcactactgtgagcttccggtcaaacgcgcc
gtgccacttgccttgggtgtgttgaatatctccaacccagactttagcgtcattgatcag
ttgtcgaggctgtctcacgatcctgatgctgagatatctcaaaatgccatcatggctatg
ggattggttagtgctggaacaaacaactcccgtgttgctggattgatgcgtcagttgagt
gaattctatagcaaggaggctggacacgtattctgcgtgcgtattgcacaggcaatgcta
catatgggcaaaggtctcatgacgttggcaccaatgcattcggataggctcatcaccagt
ggaccagctcttggcggtgttctcaccttgcttttctcttgcatggacctgaaaaatacc
cttctcgacaaaactcactacctcctgtactaccttacctgtgccatgaacccacgaatg
ctcattacagtcaacgaggatctttcgtggaggcccgtgactgtgagggttgggcaagct
gttgaaactgtcggccaggcaggtaaaccgaagacgattaccgggttccaaactcataca
actcctgtattgatcagcaccttggaacgtgcagaactcgggacggaggaagttctcagt
gtgagcagtgtcttggagggcattgttattgtcaaagacaatccagattatgaggtgccc
gagtctacgtag
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