Thalassiosira pseudonana: THAPSDRAFT_262619
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Entry
THAPSDRAFT_262619 CDS
T01078
Name
(RefSeq) spindle pole component spc97-like protein
KO
K16569
gamma-tubulin complex component 2
Organism
tps
Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tps03036
]
THAPSDRAFT_262619
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tps04812
]
THAPSDRAFT_262619
04147 Exosome [BR:
tps04147
]
THAPSDRAFT_262619
Chromosome and associated proteins [BR:
tps03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
gamma-tubulin ring complex
THAPSDRAFT_262619
Cytoskeleton proteins [BR:
tps04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
THAPSDRAFT_262619
Exosome [BR:
tps04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
THAPSDRAFT_262619
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCP_C_terminal
GCP_N_terminal
Motif
Other DBs
NCBI-GeneID:
7444867
NCBI-ProteinID:
XP_002290397
JGI:
262619
UniProt:
B8C3N1
LinkDB
All DBs
Position
5:1869476..1871548
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AA seq
676 aa
AA seq
DB search
IDSSLESIVSRILPLCSNYVVVNEYVSTCLGSYECGIIARALCEAMDKLLQEYLAFVSKL
DYQSREPYVDGRTLTMSMVHVLAQPSIRTMSILYHVVLVVQNKKGGTLLNALQNLKALNY
TGDEKGNEILTHLLNTCAVPYSRMLKTWLKAGKLHDPYNEFMIEGMEWEDWCRVQDDHVL
SSLDTSSEIVAPTLTAFGADRYRSTSNMTAVDKVYTTGRYWRAIHFCQDGSPVLPSEEQG
QYSDDANMLLNPVKLSRYIDVSYHKASDSLLHMMLEKYDLLSSLQFMKKYFLLDQGDFFV
EFLDAAESELTKGLPTVSRGRVQNSLATSIARTSDLLDDLQSGVDAPQSSQLATALRCSF
KKQSLIEELDDLHRKKGASKRNTRNRDLTGFEALQLDFKSIPFPASLVLSHSQIRSYQFI
FRQIFFAKYVERQLVTVWSDHQLMKQMVSLSDALKLTFCLRRRMLHFIQNFVYYMKFDVI
EPNWRELECKLKAARERRSNDNTTSSTRQFPRTVDDLLYEHNQFLIRIITQCLLTNSDLI
RASTKIMTTCLLFTTQMKLFMGTTKIDEHHKLTAAECSKLRHTGQNKKKNDALKTEFRMQ
REERLRRCSDRIIGELTTDNFQHMILRFDEVFSANLGEFMKSLKSDYGRRSNAHLTNLFM
QLDYNGFVSASMEEKE
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
attgattccagcctcgagagtatcgtttcgaggatactgccactctgctccaactacgtc
gttgtgaatgagtatgtgtcaacgtgcctgggaagctacgaatgtggaatcattgcccgt
gctctatgtgaagccatggacaagttgttgcaggagtatctcgcctttgtttccaagttg
gattatcagtctcgtgaaccttatgttgatgggaggacactcaccatgagtatggtacac
gttctcgctcaaccttccatccgaaccatgtccattttgtaccacgtggtattggtagtg
cagaacaagaagggtggcacgttgctcaacgcacttcagaatcttaaggctttgaattac
acaggagatgagaagggcaatgagattttgacgcacttgctcaacacttgtgcagtgccg
tacagccgtatgctcaagacgtggttgaaggcagggaagttgcatgatccatacaatgag
ttcatgattgagggaatggagtgggaggactggtgcagagtgcaagatgatcacgtgctg
agtagtcttgatacctccagtgagatcgtggctccaacactaactgcatttggggctgat
cgatacaggtctacatccaacatgactgctgttgacaaagtgtacaccactggaagatac
tggagagcaattcatttttgtcaggacggatcaccggtgctgccttcagaggagcaaggg
caatattcagatgacgcgaatatgctattgaatccggtcaaactctcgcggtatattgat
gtctcttaccacaaagcctccgactcactcctgcacatgatgctggagaagtatgattta
ctgtcgtcgttgcaattcatgaagaagtatttccttctggaccaaggggatttcttcgtt
gagttcctcgatgctgccgaaagtgagctcacgaagggcctacctaccgtgtctcggggc
cgcgtccaaaactctctcgccacttccatcgcaagaacgtcagatttgttggacgatttg
caaagtggtgtcgatgcaccccaatcgtcccagttggcgactgcattgcgttgcagcttc
aagaagcaaagtctcattgaagagcttgacgatctccaccgcaagaagggagcttccaaa
cgaaacactcgcaaccgcgatttgactggatttgaagcactccagcttgacttcaaaagt
attccctttccggcatctctcgtcctgtcacactcgcagattcgtagctaccaattcatc
tttcgtcaaatcttcttcgccaagtacgtcgagcgacagcttgtcaccgtctggtcggat
caccaactaatgaagcagatggtgtcactaagtgatgcactgaaactaacgttctgcctc
cgtcgtaggatgctccacttcattcaaaactttgtatactacatgaagtttgatgtcata
gagccgaactggagagagttggagtgcaagctgaaagctgcaagggaacgccgatcaaac
gacaatacgacgtcttctaccaggcagtttcctcgcacggttgacgacttgctgtacgaa
cacaaccagttcctgattcgcatcattacacagtgtctgctcaccaatagtgatctcatt
cgtgcatctacaaagatcatgacgacgtgtctgttgttcacaactcagatgaaactcttc
atgggcacaaccaaaatcgacgagcatcacaaactaaccgctgccgagtgctcaaagttg
aggcacactggtcaaaataagaagaagaatgacgccctaaagaccgagtttcgtatgcaa
cgtgaggagaggctgagacgctgctcggatcgcatcattggtgagctgaccacggacaac
ttccagcacatgattcttcgctttgacgaagtgtttagtgctaacctaggcgagttcatg
aagtcgttgaagagtgattatgggaggagaagcaatgcgcatttgaccaatctcttcatg
cagttggattacaatggtttcgtctcggcctcgatggaggagaaggagtaa
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