Thalassiosira pseudonana: THAPSDRAFT_262880
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Entry
THAPSDRAFT_262880 CDS
T01078
Name
(RefSeq) hypothetical protein
Organism
tps
Thalassiosira pseudonana
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPP_enzyme_N
TPP_enzyme_C
TPP_enzyme_M
Fer2_2
Motif
Other DBs
NCBI-GeneID:
7442362
NCBI-ProteinID:
XP_002291477
JGI:
262880
UniProt:
B8C5X8
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All DBs
Position
6:complement(1040446..1043324)
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AA seq
766 aa
AA seq
DB search
LSELICEVLVNFGVTHVFGGHGGAIVALVDAIEAHPKLTWVYNRCEVNSAQAAMAYAKLN
NRLGCVIATSGPGAGHLLSGLVDADQDRVPLICITGLKAAGTVRHSDFQDIDQASIFRMA
GVGFSESVNHIHQLIPLLRNALYLATSTYRCAHLAIPIDVQLGSVTAPKLLNFRQENLSK
RVLSRASDEQIRAVATVLIKERMERHHMVIFCGWRAYNLGDAIEDIADFLKVPVITSFDA
KGTIDEDSPHSFGVAGIYGFVGGGSSQSVLENCDIIVGICLPDLAKALTDKSGMQEGFCH
PGVFFKTMSIFLKEDSILCADIGDNALWMASEIIAKRGQRTITSEHMGIMGFALNAGMAA
SCSTRGKQQVLVVCGDGGFQMSSNELATMNDHRCKNVLVVIIVNGRLGRVNNEIWGPGVR
ADGCSIGSPDYVKLFDAHGYPNGKHLKTTNVREIEAAIQEGWDLASKQGLSVIVVHQDPE
THPIMHKISPASGVVAWETYLKEMNKERSMVDGNSSMDCDKFNFSKYTVGKLNGMKGWIE
SQTATRVSNYKWVGSEFLSMSPAKVFQQQLSEMYPDAPEIFATQQEKDQFDKEFWRKLMS
SFSTEELFELFDRGSSNGHPLRLQILALPKDTAYKLHAHPNIELSIGMQGKLYECKLMDF
RYNKRKLERAFPSRGSPPSAESLNNLMEQFEHCMVIEDQNESSMFMNREYASQGCARANT
IGSVHQSFSGKDEGALLFVLWSGCHANINFPANVKNVRGIELLREV
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
ctcagtgaactgatttgcgaggtgcttgttaactttggtgtcactcatgtctttggtggc
cacggcggagccatcgttgctctggttgacgccatcgaagcacatccgaagctcacgtgg
gtgtacaatcgttgcgaggtcaactcagcacaagccgcaatggcttacgccaaactcaac
aacaggcttggatgcgttatcgctacttcaggacctggagcagggcatttactatcaggc
ctagtagacgctgaccaagatcgtgttcccctcatatgtatcactgggttaaaagctgcc
ggaactgtacgccacagtgattttcaagatattgaccaagcttcaatctttagaatggct
ggggttggtttctcagagtcagtcaatcacatccatcagctcattcctctattaagaaat
gcgttgtacctcgccacgtctacttatagatgtgctcatcttgcgataccaattgatgtt
caactcggctcagttactgctccaaagctcttaaattttcggcaggaaaatctctcgaag
agagtactttctcgcgccagtgacgaacaaattcgcgctgttgcaacggtgttgatcaaa
gagagaatggaacgtcatcacatggtcatattttgcggttggagggcttacaatctagga
gatgcaatcgaagatattgctgacttcctgaaagttccagtaattacctcgtttgacgcg
aagggaactatcgacgaagacagtccacactcgtttggtgtcgctggaatatatggcttt
gttggcggagggagtagtcaatctgtcttggagaactgcgatattattgttggcatatgc
ctaccagacctcgcaaaagcgttgactgataagagtggtatgcaggaggggttttgtcat
cccggagtcttcttcaagacaatgtcaatatttcttaaggaagattcaattctctgtgca
gatattggggacaacgctctgtggatggccagtgaaatcatagcaaagcgaggacaacga
acgataacatcggaacacatggggatcatgggctttgcgctcaatgctggtatggctgct
tcttgtagtacgcgaggaaagcaacaggttctagtagtttgtggagatggggggtttcag
atgtcatctaacgagttagcaacaatgaatgatcataggtgcaaaaatgtgttagtcgtg
atcatcgtgaatggaagacttggccgagtcaacaatgagatatgggggccgggagtacgt
gctgacggttgcagtatcggatctcctgattacgtcaaattgtttgatgcacacggatat
cctaatggaaagcatctcaaaacaacgaacgtgcgtgagattgaagcagctatacaagag
ggatgggatctagcgtctaagcagggactctccgtcattgttgtacaccaagatcctgaa
acacatcctataatgcacaagatttctccagcaagcggtgttgtagcttgggaaacgtat
ctgaaggagatgaataaggaaaggagcatggttgacggtaactcgtcgatggattgcgac
aaattcaactttagcaaatacacagttggcaaactgaacgggatgaaaggttggattgag
tcacaaactgccacaagagtgtcaaactataaatgggttggaagtgaattcctgtccatg
tccccagcgaaagtgttccagcaacaactgtcagagatgtaccccgatgctccggagata
tttgcaacacaacaagagaaagatcagttcgacaaggaattttggaggaaactaatgtcg
agcttttcgacagaggagttgtttgagctgtttgatagaggctcaagcaatgggcatcct
cttcgtttgcagattcttgccctcccgaaggatacggcttacaagcttcatgctcatccc
aacattgagctctcaattggaatgcagggcaagctgtatgaatgtaaattaatggatttc
cggtacaacaaacgaaaacttgaaagagcatttccatcaagggggtctccaccctctgct
gaaagtctcaacaatctaatggagcagtttgaacattgcatggtgatcgaggatcaaaac
gagagctcaatgtttatgaatagagagtatgcttcgcaaggatgcgcaagagccaatact
attgggagtgtccatcagtctttctcgggcaaagacgaaggagcgcttctcttcgtattg
tggagtggatgtcatgcgaacattaacttccctgcaaacgtcaagaatgtccgaggtatt
gagctgttgagagaggtgtga
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