Thalassiosira pseudonana: THAPSDRAFT_26293
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Entry
THAPSDRAFT_26293 CDS
T01078
Name
(RefSeq) probable malate synthase
KO
K01638
malate synthase [EC:
2.3.3.9
]
Organism
tps
Thalassiosira pseudonana
Pathway
tps00620
Pyruvate metabolism
tps00630
Glyoxylate and dicarboxylate metabolism
tps01100
Metabolic pathways
tps01110
Biosynthesis of secondary metabolites
tps01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
THAPSDRAFT_26293
00630 Glyoxylate and dicarboxylate metabolism
THAPSDRAFT_26293
Enzymes [BR:
tps01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.9 malate synthase
THAPSDRAFT_26293
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GFIT
Motif
Pfam:
MS_TIM-barrel
MS_C
MS_N
Motif
Other DBs
NCBI-GeneID:
7442396
NCBI-ProteinID:
XP_002291513
JGI:
26293
UniProt:
B8C648
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Position
6:complement(1221943..1224104)
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AA seq
555 aa
AA seq
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MEARSPTVQIEVHAPICAAASEILTPDSLRFVGYLCNKFEDRRQALLNARKSKAMEFDSG
GLPHFEKSDGSGSGGDPHWRCASIPGDVMDRRVEITGPVDRKMVINGLNSGANVYMADFE
DSTSPTWSNLTEGQRNLRDATRGKITYTNKQTGRVYALKEKTAVLFVRPRGWHLDEAHVT
VNGRVASGSLFDFALYFYHNVHCLLQKGSRPYFYLPKLEHYLEARLWNDVFKAAQSYFGV
PYGTIRATVLLETITAAFQMEEILYELRDHSLGLNCGRWDYLFSYIKKFKCHDDKIAPDR
SHLTMTDTPLLKSYVDRLIYICHKRGTFAMGGMAAQIPIKGDPAANEAAMARIEKDKIRE
ALAGHDGTWVAHPALVSLAKAVFDRYMPTPNQIDKNPGLTGKDVTEADLLRLQLVPKGTA
ITSTGLQKGVSIVLAYTEAWLRGIGCIPLNHHMEDAATAEISRAQIWQWKYHGVKTEDDG
IVISASRISKLVHDEVKRCSGGEDRGKWFLAGKLVEDMLTKDRLDDFLTTVCYPHILTTR
YEGDVIPEDEPSSKL
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggaagcgcgctcacccaccgttcaaattgaagtgcacgctccaatttgcgctgctgca
tccgagatcctcacgcccgattccctccgcttcgtaggctacctctgcaacaagtttgaa
gatcgtcgtcaagccttattgaatgcacgaaagagtaaggctatggagtttgatagtggt
ggcttgcctcattttgagaagagtgatggtagtggcagtggcggtgatcctcattggagg
tgtgctagtattccgggggatgtgatggatcgtcgtgtggagatcactggacccgtcgat
cgcaagatggtcatcaacggtctaaatagcggtgcgaacgtctacatggcagactttgaa
gactccacatcccctacttggtccaatctcaccgaaggccaaaggaacctacgcgatgct
acacgtggtaaaatcacctacaccaataagcagactggacgagtgtatgctctcaaggaa
aagaccgccgtgctatttgttcgtcctagaggatggcatttggatgaggcacatgtgact
gtgaatggcagggttgcctcggggagtttgtttgattttgcgctgtacttctatcacaat
gtgcattgtcttttgcaaaagggatctcgtccttacttctacttgccaaagttggagcat
tacttggaggcacggttgtggaatgatgtgtttaaggctgctcagagttattttggagtt
ccttacggtactattcgtgccacggttttgttggagacgatcacagctgcttttcagatg
gaggagatactttacgagctgcgagatcactctctcggtttgaactgtggccgttgggac
tatctcttttcttatatcaaaaagttcaaatgtcatgatgacaagattgctccagacaga
tcccatcttaccatgacggatactcctttgttgaagagttacgtagatcggttgatttac
atttgtcacaagagagggacatttgcgatgggagggatggctgcacagatacccatcaaa
ggagatccagctgccaatgaggccgcgatggcgaggattgagaaggataagattagagag
gccttggctggtcacgatggaacttgggttgcacacccagcattggtgtcgttggcgaag
gctgtctttgataggtatatgccaacaccaaatcagattgacaagaatccgggtttgaca
ggcaaggacgtgacggaagctgacttgttgagattgcagttagttccgaaagggactgca
attacgagcactggtcttcaaaagggagtttcaattgtgcttgcatacacggaggcttgg
cttcgtggcattgggtgcatccctttgaatcatcatatggaggacgcggcaactgctgag
atttcgagggctcagatttggcaatggaagtaccacggggtaaaaacggaagacgatggc
attgttattagtgcatcacggatctccaaattggttcacgacgaggtgaagcgttgcagt
ggtggagaggatagaggaaaatggttcttggctggcaagttggtggaggacatgttgacg
aaagacaggcttgatgacttcttgacaactgtctgctacccacacattctcacaactcgt
tacgagggagatgttattccagaggatgaaccgtcttcaaagctttga
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