KEGG   Thalassiosira pseudonana: THAPSDRAFT_263480
Entry
THAPSDRAFT_263480 CDS       T01078                                 
Name
(RefSeq) hypothetical protein
  KO
K01965  propionyl-CoA carboxylase alpha chain [EC:6.4.1.3]
Organism
tps  Thalassiosira pseudonana
Pathway
tps00280  Valine, leucine and isoleucine degradation
tps00630  Glyoxylate and dicarboxylate metabolism
tps00640  Propanoate metabolism
tps01100  Metabolic pathways
tps01110  Biosynthesis of secondary metabolites
tps01200  Carbon metabolism
Brite
KEGG Orthology (KO) [BR:tps00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    THAPSDRAFT_263480
   00640 Propanoate metabolism
    THAPSDRAFT_263480
  09105 Amino acid metabolism
   00280 Valine, leucine and isoleucine degradation
    THAPSDRAFT_263480
Enzymes [BR:tps01000]
 6. Ligases
  6.4  Forming carbon-carbon bonds
   6.4.1  Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
    6.4.1.3  propionyl-CoA carboxylase
     THAPSDRAFT_263480
SSDB
Motif
Pfam: CPSase_L_D2 Biotin_carb_N Biotin_carb_C Biotin_lipoyl Dala_Dala_lig_C ATP-grasp ATP-grasp_5 PCC_BT ATP-grasp_3 ATPgrasp_ST Biotin_lipoyl_2
Other DBs
NCBI-GeneID: 7444988
NCBI-ProteinID: XP_002292388
JGI: 263480
UniProt: B8C7R3
LinkDB
Position
9:complement(102957..105373)
AA seq 683 aa
FRKILIANRGEIAIRVIRTARKLNIKTVAIYSTADAKSLHVSMADEAVCIGPPASNMSYL
DIDKVCAAIEMTGSEGVHPGYGFLSENGLFAKRVELLDVRFIGPSTHAIQSLGDKIESKL
LADAAGVSTIPGFNGVVTSPAHAIQIAHEIGYPVMIKASSGGGGKGMRICYTDAQVEEGY
RLGSAEAKSFFGDDRLLVEKYVEDPHHIEIQVLSGKNPKTGELDILCFAERECSIQRRNQ
KVIEESPSPHLHPSTRREMIRQVKSLVREVNYESAGTVEFLVDKDQNFYFLEMNTRLQVE
HPVTEMISGDGYHSGNYVDLVHGMLEVAAGRVLGYEGANVRYTGHAIEARVYAEDPLRGF
LPSTGPLVKYAEPPALLNVGDNGETCNIRVDTGAVPGTIISPHYDPIISKIIGYSPLDRG
HAIKGLGLALDQYILRGVQHNVPFCRDVLRNNHFVKGYTPTGFIGQHYPNGFSGGRLSEK
EICELVVIAREIGKKRCMFGDAYLVQSRIDLERDCSITASVTKLPCADSGERSENDGSKA
AQAVVLCKVDHDPADDLALVSLPGEERALQVHGEDETGVLKLTMFGLDADILVMSRGEYE
LACHMNKPIPKDFGNFVLSPMPGTLISFAVEEGDVVEIGQELCVVEAMKMQNVIRSHKAG
AKVGKLHGVIGGSLRADEILMEF
NT seq 2050 nt   +upstreamnt  +downstreamnt
tttcgaaagatcctcatcgccaacaggggggaaatagccatccgagtcatccgcacggct
cgcaaactaaacatcaaaacagtcgccatctactccacagccgatgccaaatccctccac
gtttccatggcagatgaggcagtttgcattggtccaccggcaagcaacatgagttatttg
gatatagacaaggtttgtgcggcgattgaaatgacgggtagtgagggagttcatccgggg
tatggatttttgagtgagaatggattgttcgcgaagagggtagagttgttggatgtacgg
tttattggaccgtcgactcatgctattcaatctttgggagacaagattgaatccaagctc
ttggcggatgctgcaggagtgtcgaccattcctgggttcaatggtgttgtcacctctcca
gcgcatgccattcaaattgctcacgagattggatatccagttatgatcaaggcatcgtcg
ggtggaggaggaaagggtatgcgaatttgttacaccgatgctcaagtggaggaaggatat
cgattgggatctgccgaggccaagagtttttttggcgacgatcgtctgctcgttgaaaag
tatgtggaagatccacatcatattgagattcaggtattgtcgggtaagaatccaaagact
ggagagttggatatactgtgcttcgctgaacgtgaatgcagtattcaaaggagaaatcaa
aaggtgattgaagagagtccaagtccacatttgcatccttcaacaagacgagagatgatt
cgtcaagtcaagtctctcgtgagggaggtgaactatgagtcggccggtactgtggagttt
ctcgtggataaggatcagaacttttacttcctcgagatgaatacgagattgcaagtggag
cacccggtgacagagatgatttcaggtgacggttatcattccggaaattacgtggattta
gtacatggaatgttggaggtggcagcaggtcgcgtacttggatatgagggagccaatgta
cgctatactggacatgcgattgaagcacgtgtctatgctgaagatccgctgagaggtttc
ctgccgagtactgggccgttggtgaagtatgccgagcctccggcattgctgaatgtgggt
gacaatggagagacgtgtaatatccgcgttgacacgggtgctgtgcccggaacaatcatt
tctccacactatgatccaatcatctccaagatcattggttacagtccgttggatcgcggc
catgccattaaaggcctagggttggcccttgatcagtacattcttagaggggtacagcac
aacgttcccttttgtcgagacgtcttacgtaacaaccactttgttaaaggatacacacct
acagggttcattggtcagcactatcctaatggattctcaggaggaaggctatcggaaaag
gagatatgtgaattggttgtgattgcaagagagattggaaagaagagatgcatgtttggt
gatgcctacttggttcaatcaaggattgacttagaaagagattgcagtatcacagcatct
gtcaccaagttgccctgcgcagactcgggtgaaagaagtgaaaatgacgggagcaaggcg
gctcaagcggtagtgctttgtaaagtcgatcatgatccggctgatgatttggctctggta
tcgctaccaggagaggaaagagctctgcaggtacatggtgaggacgaaacaggagtgctc
aaattaacaatgtttggattggatgctgatattctcgtcatgagccgtggagagtatgaa
ctggcatgtcacatgaacaaaccgataccaaaagatttcggtaactttgttcttagccca
atgcccggaacgctgatcagtttcgccgttgaggaaggagacgttgtagaaattggtcaa
gagctgtgtgtagtggaagcaatgaagatgcaaaacgttattcgttctcacaaagctggt
gccaaagttggaaagctacacggtgtcattggcggaagtctccgtgctgatgagatattg
atggaattcg

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