KEGG   Thalassiosira pseudonana: THAPSDRAFT_263509
Entry
THAPSDRAFT_263509 CDS       T01078                                 
Name
(RefSeq) mlh1-like protein
  KO
K08734  DNA mismatch repair protein MLH1
Organism
tps  Thalassiosira pseudonana
Pathway
tps03430  Mismatch repair
tps03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:tps00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    THAPSDRAFT_263509
   03460 Fanconi anemia pathway
    THAPSDRAFT_263509
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tps03400]
    THAPSDRAFT_263509
DNA repair and recombination proteins [BR:tps03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    MutL homologs
     THAPSDRAFT_263509
SSDB
Motif
Pfam: Mlh1_C DNA_mis_repair HATPase_c_3 HATPase_c
Other DBs
NCBI-GeneID: 7449303
NCBI-ProteinID: XP_002292221
JGI: 263509
UniProt: B8C801
LinkDB
Position
9:354672..357805
AA seq 749 aa
SKKIRPLPKEVVDRIAAGEVVQRPVSVVKELLENSLDADGTQIDIQCQKGGLESITITDN
GTGISPTSLPLACTRFATSKLVTVDDLKSIRTFGFRGEALASASMVGRVCISKTLQNNNC
AFKMHYRDGNPTSDPKLPTNKNSTATIKPKPSAGKEGTTITVQDLFYNIPSRRRAMEGRR
SERDEYDRILNCVQRYAVHEAKRGVGFVCRGGGGGGGGKGAAGRATTKDVIGHIFGTAVS
RELLPLNAGEGDVEAVTTGLITNGSYSAPKSSAAFLLFINDRLVESASLRRAVESIYSDA
LPKGGKPFVYLSLELPGPHVDVNVHPTKREVAFLHEDRLCVALAAAVKEVIGSATSSRTF
AVAASGALLAPEEKRVRVQPKKAIAMGEREGLVVSTASNVTTEIGESDSGAVDDAMAVDE
PEPQQIVDNTNQQQDQQQNEQPKKRHADESKQPPLSKKPYDPSRLVRTNSAAPAAPNAIV
VRINANNNIVRPKKISPTECDYESIAKLRGDIVSRNHQNLNETLRGASFVGAVSRSRSLI
QYGIDLLMINHRELARETFYQIALMKFNGMPIATLGGGGVDSDATHESLRVKVNKTNATL
AKQATSCLSEKADMLEEYFSIKFERRGKSLFVTGLPVLLEGHSPQPHALPLFLMRLATEV
NWMDERLCFQNVCTELGSYYSEPPVANDEEENAATEAPDYIDDEAKAFVKHTLFPAISFL
LVPPKEFATNGTVLKLANLTSLYKVFERC
NT seq 2250 nt   +upstreamnt  +downstreamnt
tccaaaaagattcgccctctgcccaaagaggtagtggaccgtatcgctgcaggagaggta
gtgcagcgtcctgtcagcgtggtgaaggagttgttagagaatagtttggatgccgacgga
acacaaatagacattcaatgccaaaaaggaggactcgagtccatcacaatcaccgacaac
ggaacgggcatctcccccacctccctccccctcgcttgcactcgcttcgctacctccaaa
ctagtcacggtggatgatttgaagagtatacgaacgtttgggtttcggggggaggcgttg
gcgagtgcgagtatggttgggagggtttgtattagtaagacattgcaaaacaacaattgt
gcattcaaaatgcattatagagatggcaatccaacatcggatccaaaactacccaccaac
aaaaattccactgctacaatcaaaccgaaaccctccgcgggcaaagaaggaaccactatc
acagtccaagatctattctacaacattccctcacgacgtcgtgccatggaaggacggcga
agtgaacgtgatgaatatgatagaatattgaattgcgttcagaggtatgcagtgcacgaa
gcgaaacggggagtggggttcgtgtgccgtggcggaggtggaggagggggtggcaaaggt
gcagctggacgagctacaaccaaggatgtcattgggcatatctttggtacggcagtgagt
agggaactattacccttgaatgctggggagggagatgtggaggctgttaccacaggactc
atcaccaatgggtcgtactctgcaccaaaatcatctgcagcattccttctctttatcaat
gatcgtttagtagagagtgcctcgcttcgtagagcagtggagtcaatctattcagacgca
cttccaaaaggaggcaaaccattcgtctatctgtcattggaactgcctggacctcacgta
gatgtcaatgttcatccaacaaagcgagaggtggcattcttgcacgaggatagattgtgc
gttgcactagcagcggcagtgaaggaggttattggaagtgcgacttcttcgagaacattt
gcagtggctgcttcgggggcgttgttggcacccgaagaaaagagagttagagttcaacca
aagaaagccattgcaatgggagagcgggaagggcttgtcgtgtccactgcaagcaatgta
acaactgaaattggcgaatcagatagtggtgcggttgatgatgcgatggcagtggatgaa
ccagaaccacaacaaattgttgacaatacaaatcaacaacaagatcagcaacagaatgaa
caacccaagaaacgacatgcagatgagagcaaacaaccacctttatcaaagaaaccgtac
gatccctctaggttggtaagaacaaattctgctgctccggctgctccaaatgccatcgtt
gtgagaatcaatgccaacaataatattgtacgtcccaagaagatatctcccaccgagtgc
gattacgaatccatcgcaaagcttcgaggagacattgtatctcgcaaccaccaaaacctc
aacgagacgctacgtggtgcttctttcgtgggtgcggtatcgaggagtcgaagtctcatt
cagtacggcattgacttgcttatgattaatcatcgtgaacttgcacgggaaactttttat
cagattgcattgatgaagttcaatggcatgccgatagctacactcggtggaggaggtgtc
gattcagatgccacacatgaaagcttgcgggtgaaggtgaacaagacaaatgctacgttg
gcaaagcaagcaacgagctgcctctctgagaaagcagatatgctagaggagtacttctcc
atcaagtttgaaaggcgaggcaaatcactgttcgtcacggggcttccggttctcttggaa
ggtcactctcctcaaccgcatgcacttcctctcttcttgatgagactagcaaccgaagta
aattggatggacgaacggctatgcttccaaaacgtatgcacagagctaggttcgtattac
tcagagccaccagttgcaaatgacgaggaggaaaacgccgcaacggaagcccctgactat
atcgacgacgaggctaaagcttttgtaaagcacactctatttccagccatcagctttctt
ctagttcctccgaaagagttcgcgacaaacggaacggtgctgaagctagctaacctcacc
tccttgtacaaagtgtttgagaggtgctga

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