KEGG   Thalassiosira pseudonana: THAPSDRAFT_263717
Entry
THAPSDRAFT_263717 CDS       T01078                                 
Name
(RefSeq) hypothetical protein
  KO
K02325  DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
Organism
tps  Thalassiosira pseudonana
Pathway
tps03030  DNA replication
tps03410  Base excision repair
tps03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tps00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    THAPSDRAFT_263717
   03410 Base excision repair
    THAPSDRAFT_263717
   03420 Nucleotide excision repair
    THAPSDRAFT_263717
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tps03032]
    THAPSDRAFT_263717
   03400 DNA repair and recombination proteins [BR:tps03400]
    THAPSDRAFT_263717
Enzymes [BR:tps01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     THAPSDRAFT_263717
DNA replication proteins [BR:tps03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    THAPSDRAFT_263717
DNA repair and recombination proteins [BR:tps03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      THAPSDRAFT_263717
SSDB
Motif
Pfam: DNA_pol_E_B
Other DBs
NCBI-GeneID: 7446911
NCBI-ProteinID: XP_002292909
JGI: 263717
UniProt: B8C9U5
LinkDB
Position
10:complement(913259..915165)
AA seq 504 aa
FKMRGLSIQAPALNSILNVLKNEPPTSKDDTLFAIIDEIKEKMTTVGGGGMNQCVVTTDL
LEDVVADMSRGAKDVTEEAVQLLDAFKTPRLEYDSMRKVFSLVEGGKSVCGEAVDKVDMF
SQRYSLIHQRILRQDIFQPKLITARGGGTTHTLTPVESLLGRSGRRFLLGMIVQVEEGKY
YLEDHTSQVLLNFSQASLLTDGFVTENSVVLVEGEAIDGVLHVHHMGNPIVENRSDSIKA
IGLQNTDIFNSIGSLSELEKLRDQEMKHGQDGMFVVLSDVHLDSPAVIEKIELMLEGYSD
FTPLPIFVFMGNFTSKPLSGASDGTKAMIGYFEDLAAVITKFPNIAAEGRFVFVPGPNDP
GITGVLPRGPIPNFFTSSLRSKVKHAVFASNPCRMRFFSKEIVFFRDDLVGKMRRHCLLQ
PRSSVHKLSQFAVKTVLDQGHLSPLPLSASPIYWQHDHALRLYPFPDALIVGDRVDQYYE
NYEECDAINPGPFSAGFNFVVYRP
NT seq 1512 nt   +upstreamnt  +downstreamnt
ttcaaaatgcgtggcctctccatccaagcacccgcactcaactctatcctcaacgttctc
aaaaacgaacctcccacctccaaagacgacactctatttgcaatcattgacgaaatcaaa
gagaaaatgaccaccgtaggcggtggaggcatgaatcaatgtgtagtcaccacagaccta
ttggaagacgtagtggccgatatgagccgaggcgccaaagatgtcaccgaggaggctgtg
cagttattggatgcgttcaaaacgccacggttggagtatgattcgatgaggaaggtgttt
agtttggtggagggggggaagtctgtttgtggagaggctgtggataaggtcgacatgttc
agtcaacgctactccctaatccatcaacgtatcctccgtcaagacattttccaaccaaag
cttatcaccgctcgtgggggggggacaacacatacgctcactccggtggagagtttgttg
ggaaggagtggcaggaggtttttgcttggtatgattgttcaggtcgaggagggcaagtac
taccttgaagatcatacctcacaagtgcttctaaacttctcccaagcctcactactgacg
gatggattcgttaccgaaaatagtgttgttttggtagaaggagaggctattgatggagtc
cttcatgttcatcacatgggaaatccaattgttgaaaacagatccgattcaatcaaagcc
attggcctccaaaacactgacatcttcaactccatcggatctctctcggaactcgaaaag
ctacgtgaccaagaaatgaaacatggccaagatggaatgtttgtcgtattatcagatgtg
catctcgatagtcctgcggtgattgaaaagattgagttaatgttggaggggtacagtgac
ttcacaccgctgcccatctttgtgttcatggggaactttacgtcaaagccactctcggga
gcgtcggatggtaccaaagcaatgattggctactttgaggatctcgcagccgtcattacc
aaattcccaaacattgcagcagaaggacggtttgtctttgtccccggtcctaacgatcct
ggaatcactggagtattgcctcgtggtcctatacccaactttttcacctcgtcattgcgt
tcgaaagtgaaacatgctgtgtttgcgagcaatccatgccgtatgaggttcttttcgaaa
gagattgtgttctttagggatgatttggtggggaagatgagacgtcactgcttgttgcag
cctcgttcatcagtacacaagctatcacaatttgcagtcaagactgtattggatcaaggt
catttatcaccgctgcctctctcggcgagtccaatctactggcaacacgaccatgcactt
cggctttatccgtttcccgatgcacttattgtcggagacagagtggatcaatactatgag
aactacgaggaatgtgacgctatcaaccctggcccattttcagctggattcaattttgtt
gtctatcgtcct

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