Thalassiosira pseudonana: THAPSDRAFT_263742
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Entry
THAPSDRAFT_263742 CDS
T01078
Name
(RefSeq) synaptobrevin
KO
K08515
vesicle-associated membrane protein 7
Organism
tps
Thalassiosira pseudonana
Pathway
tps04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
THAPSDRAFT_263742
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tps04131
]
THAPSDRAFT_263742
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tps04147
]
THAPSDRAFT_263742
Membrane trafficking [BR:
tps04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
VAMP
THAPSDRAFT_263742
Exosome [BR:
tps04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
THAPSDRAFT_263742
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Synaptobrevin
Taxilin
RIFIN
Fzo_mitofusin
CHD5
T2SSF
Orf78
DltD
Cgr1
Motif
Other DBs
NCBI-GeneID:
7449348
NCBI-ProteinID:
XP_002292935
JGI:
263742
UniProt:
B8C8V5
LinkDB
All DBs
Position
10:complement(1053543..1054022)
Genome browser
AA seq
159 aa
AA seq
DB search
KYPSRTAIQMLTDLYTPYSEQFSLQAKSATTNSLTKKSKSILSSYCKKYDDASKVDKASA
LNTKVEEVKVQMQDNIAAMLKNTEQAESLAERSNQLNEQANVFQKKSKDLRKQMRCKNIK
MTIILVTLVVGVLVIILVPLIVRAKNAASGNRMLRGMMD
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
aaatacccctcccgcacagcaatccaaatgctcaccgacctctacaccccctactccgaa
caattctccctccaagccaaatccgccaccaccaactcactcaccaaaaaatcaaaatcg
atcctctcctcctactgcaaaaagtacgacgatgcctccaaagtcgacaaggcatcggct
ctcaacaccaaagtcgaagaagtcaaggtacaaatgcaagataacattgcggcaatgctc
aagaatacagaacaggcggagagtttggcagagaggagtaatcagttgaatgaacaggcg
aatgtgtttcagaagaagagtaaggatttgaggaagcagatgagatgtaagaacatcaag
atgacgattattttggtcacgttggtggtgggagttttggttattattttggtgccgttg
attgtgagggcgaagaatgctgctagtgggaacagaatgttgagaggaatgatggattag
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