Thalassiosira pseudonana: THAPSDRAFT_264058
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Entry
THAPSDRAFT_264058 CDS
T01078
Name
(RefSeq) phosphatase 2A (PP2A) regulatory subunit B-like protein-like protein
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
tps
Thalassiosira pseudonana
Pathway
tps03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
THAPSDRAFT_264058
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tps01009
]
THAPSDRAFT_264058
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tps03019
]
THAPSDRAFT_264058
03036 Chromosome and associated proteins [BR:
tps03036
]
THAPSDRAFT_264058
Protein phosphatases and associated proteins [BR:
tps01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
THAPSDRAFT_264058
Messenger RNA biogenesis [BR:
tps03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
THAPSDRAFT_264058
Chromosome and associated proteins [BR:
tps03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
THAPSDRAFT_264058
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
COG3_N
DUF4187
Pkinase
Motif
Other DBs
NCBI-GeneID:
7450505
NCBI-ProteinID:
XP_002293625
JGI:
264058
UniProt:
B8CBR2
LinkDB
All DBs
Position
13:complement(834274..835696)
Genome browser
AA seq
364 aa
AA seq
DB search
IPLERFERITKELCNLPTFFHKPLYERILINLPPVVTYGIFHHYWSMEMAPFDKNERFFR
LLKQPEVEFITRDDFFPYIKELLNDHPGLEFLSNHAEFQDKYAVTVITRIFYSVNLCHSG
RITSRQIRKSNLLSVFQQVDEEEDINKVTKYFSYEHFYVLYCRFWELDHDRDYKITREDL
LKYGEHSLSHMIVDRIFDAAPRPFEGSDAASNYLSYEDFIFFMLSEEDKSNEFSVRYWFT
CVDVDGDDKLNNMEMRSFYAVQLHRMQCMGHEVVPFEDMLCQMMDMIKPANEEFLIVEDF
LQPHCSQVAGALFDALFNVNKYVMFEQRDPFLERQKREDEFETDWDRFACIDYNRLAMEE
EARE
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
attcctctagaacggtttgaacgaattaccaaagagttgtgcaatttgccaaccttcttt
cataaaccgttgtatgaacgaattttgatcaatctgccaccggtggtgacgtatgggata
ttccatcactattggtctatggagatggctccgtttgataagaacgagaggttttttaga
ttgttgaagcagccggaggtggagtttattacgagggatgatttctttccttatattaag
gagttattgaatgatcatccgggactcgagttcctatccaaccacgcagaatttcaggac
aagtacgcagtcaccgtaatcacccgcatcttctactcagtcaacctctgccactctggt
cgcattacctcccgtcaaatacgaaagtccaatctactatcggtctttcaacaagtggat
gaagaagaggacattaataaggttaccaaatacttctcctatgaacacttttacgttctt
tactgccgtttttgggaattggaccacgatcgtgattataaaattacgagggaggatttg
ttgaagtacggagaacacagtttgagtcacatgattgtcgatcggatatttgatgctgcc
ccccgtccatttgaggggagcgatgccgcctcgaattacttgagttatgaggatttcatc
ttcttcatgttgagtgaggaggataagtcaaatgagttttcggttcggtattggttcact
tgcgtggatgtggatggggatgacaagttgaacaatatggagatgcgttctttttatgcg
gtgcagttgcatagaatgcagtgtatgggtcatgaggttgtgccttttgaggatatgttg
tgccagatgatggatatgatcaagccggcgaatgaagagtttttgattgtggaggacttt
ttgcagcctcattgctctcaagtggctggtgctctctttgacgcactgttcaatgtcaac
aaatacgtcatgtttgaacagcgtgatcctttccttgagagacaaaagagagaagatgaa
tttgagacagattgggacagattcgcctgcattgactacaaccggttggccatggaagag
gaggcacgagag
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integrated database retrieval system
