Thalassiosira pseudonana: THAPSDRAFT_264206
Help
Entry
THAPSDRAFT_264206 CDS
T01078
Symbol
RPT1
Name
(RefSeq) 26S proteasome regulatory ATPase subunit
KO
K03061
26S proteasome regulatory subunit T1
Organism
tps
Thalassiosira pseudonana
Pathway
tps03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
THAPSDRAFT_264206 (RPT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
tps03051
]
THAPSDRAFT_264206 (RPT1)
Proteasome [BR:
tps03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
THAPSDRAFT_264206 (RPT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
OB_PRS7
AAA_lid_3
AAA_5
AAA_2
AAA_16
AAA_22
nSTAND3
DUF815
RuvB_N
AAA_28
AAA_7
Prot_ATP_ID_OB_C
AAA_19
AAA_18
AAA_24
AAA_33
TIP49
Mg_chelatase
AAA_14
RNA_helicase
AAA_11
AAA_3
IstB_IS21
Motif
Other DBs
NCBI-GeneID:
7441808
NCBI-ProteinID:
XP_002293973
JGI:
264206
UniProt:
B8CCP1
LinkDB
All DBs
Position
14:complement(<757735..>759220)
Genome browser
AA seq
431 aa
AA seq
DB search
PPPLDSDDIALLKSYGLGPYSVPIKEIEEEIKKHQQTVKDLIGIKESDTGLSQPSQWDLV
GDKQMMQEEAPLQVARCTKIIAGEDSHAAGGAAAANNDNPTAQLAGNKYVINVKQFAKFV
VGLGEKVAPTDIEEGMRVGVDRAKYSIQIPLPPKIDPTVSLMTVEDKPDVTYEDVGGAKD
ALEKLREVLETPLLHPERFVALGIEPPKGVLLYGPPGTGKTLTARAVANRTDACFIRVIG
SELVQKYVGEGARMVRELFTMARSKRACIIFFDEVDAIGGTRSGSDDNGSDNEVQRTMLQ
IVTELDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRGHILKIHSKR
MNCDRDIRFELVARLCPNTTGAELHSVCTEAGMFAIRARRKNVSEKDFLDSVNKVVKGYK
KFSSTPKYMVY
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
ccgccgcccctcgattccgatgacattgccctcctgaaatcctacggcctcgggccctac
agcgtccccatcaaggagatcgaggaggaaatcaaaaagcatcaacagacggtcaaagat
ttgatcgggatcaaggagagtgatactggcttgagtcagccgagtcagtgggatctagtg
ggggataagcaaatgatgcaggaggaggcaccgttgcaggttgctcggtgcaccaagatt
atcgccggagaggacagtcacgccgctggaggagcagcagcagccaacaacgacaatccc
accgcacaactcgccggaaacaaatacgtaattaacgtcaagcaatttgccaaattcgta
gtcggcctcggcgaaaaggtagcccccaccgacattgaggaggggatgcgcgtgggcgtc
gaccgtgccaaatactcgattcaaatccccctccctcccaagattgatccgactgtgagc
ttaatgaccgtggaggataagccggatgtgacgtatgaggatgtgggtggggcgaaagat
gctctggagaagttgagggaggtgctggagacgccgttgttgcacccggagaggtttgtg
gctttggggattgagcctccgaagggtgttttgctgtatggtcctcctggaacgggcaaa
accctaaccgccagagcagtagccaaccgaaccgacgcctgcttcatccgcgtcatcgga
tccgaactagtccaaaaatacgtcggagaaggagcgcgtatggtccgtgaactattcacc
atggctcgctccaaacgagcatgcatcatcttcttcgacgaagtcgatgccatcggaggt
actcgatcgggaagcgacgacaacggcagtgataacgaagtgcagagaaccatgttgcaa
attgttaccgagttggatggatttgatgcccgtgggaatatcaaagtgttgatggcgacg
aatcgacctgacactctggatccggcgttgttgcgtcccggtcgtctcgatcgtaaggtg
gaattcggcctccccgatcttgaaggaaggggacatattctcaagattcactcaaagagg
atgaattgcgatcgtgacattcgttttgagttggtggcacggttgtgtcctaatactacc
ggggcggagttgcatagtgtttgtactgaggcgggtatgtttgctattcgggctaggagg
aagaatgtgagtgagaaggactttttggatagtgtgaataaggttgtgaaggggtacaag
aagtttagttcgacgccgaagtacatggtgtac
DBGET
integrated database retrieval system
