Thalassiosira pseudonana: THAPSDRAFT_264322
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Entry
THAPSDRAFT_264322 CDS
T01078
Name
(RefSeq) eukaryotic translation initiation factor
KO
K03260
translation initiation factor 4G
Organism
tps
Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tps03019
]
THAPSDRAFT_264322
03012 Translation factors [BR:
tps03012
]
THAPSDRAFT_264322
Messenger RNA biogenesis [BR:
tps03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
THAPSDRAFT_264322
mRNA cycle factors
Stress granule specific factors
THAPSDRAFT_264322
Translation factors [BR:
tps03012
]
Eukaryotic type
Initiation factors
eIF-4
THAPSDRAFT_264322
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
MA3
Motif
Other DBs
NCBI-GeneID:
7443948
NCBI-ProteinID:
XP_002294261
JGI:
264322
UniProt:
B8CDK4
LinkDB
All DBs
Position
15:complement(<622555..>625221)
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AA seq
541 aa
AA seq
DB search
RGGGGAGSGGNRGQDRRQSRGGSQRGGGDDWNRGIEKQVKGILNKMTKEKFDKLSDQMCD
IPILSYNMLSMFIKLVYEKAIGEPYLSDMYANLCYRLAARIECQNDATKMNTFKRSLLNK
CEDEFNKQDIYNGWKEEKKAYDKIKATLTEPERVSKEEDLEFRRMKIKKQMLGNVKFIGE
LYKLGMLKEKIMRFCIQSLMKLEEDDDMDEEDHEALCNLFITIGKTIDNPKAQPYMQNYF
QKISALSDDTKNLSSRSRFMYKDLIEMRANGWQTRRKLETAKTLDEIRKDAEREERAEAQ
RAAQQNSGGSYRGGGRGGGYDSRDSRGPPRGGDVRNERNDSQRGIGGGGGGGGEVFTKEK
LELRAKNMRNEFKEGHDEKELLMSMDEVLGSPDAGKTVVQVNVEYAIDCKAPERQALIEM
IVILFKNGKLSKSDVQVPMLDMVEFIDSFVVDSPGAFGYLGEMLSAFLDVKTLDIAWLCD
ATSKVMNKSDQVKVIDHAMKVMTANYGEGATRACFGGPGESVALSQLLGQAEFEKLVSEY
L
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
cgcggtggtggtggtgctggaagcggtggaaatagaggacaggacaggcgtcaaagtcgt
gggggtagtcaacgtggtggtggagatgattggaatcgtggtattgagaagcaagtcaag
ggtattctgaacaagatgacgaaggagaagtttgacaagctttccgatcagatgtgtgac
attcccatcttgagttacaatatgctctccatgttcatcaagctagtgtacgaaaaggct
atcggcgagccctatctttcggatatgtatgccaatctctgttatcggcttgcggctcga
attgaatgccagaacgacgccaccaagatgaacaccttcaaacgttcgcttcttaacaag
tgtgaggacgagttcaacaagcaggatatctacaatggctggaaggaagagaagaaagcc
tacgataagatcaaggcgacattgaccgagccagagcgtgtcagtaaggaagaggacttg
gagttccgtcgtatgaagatcaagaagcaaatgcttggaaatgtcaagtttattggagaa
ttgtacaagcttggcatgttgaaggagaagatcatgcgtttctgcattcaaagcttgatg
aaactcgaggaagacgatgatatggatgaggaagatcacgaagccctctgcaacttgttc
atcacaattggtaaaacgatcgacaaccccaaagcccaaccctacatgcagaactacttt
caaaagatttccgccttgagtgatgacaccaagaaccttagctcgcgatctcgcttcatg
tacaaggatttgattgaaatgagagccaatggatggcagactcgtcgtaagttggagacg
gcaaagactttggatgagattcgtaaggatgcggaacgtgaggagcgtgcggaagcgcag
cgtgctgctcagcagaatagtggtggatcctaccgcggtggtggaagagggggaggatac
gactctcgtgattctcgtgggcctcccagaggaggcgatgttcgcaacgaacgcaacgac
tcacaacgaggaatcggcggcggcggtggtggcggcggtgaagtgtttactaaggagaaa
ctggaacttcgtgccaagaacatgcgcaacgaattcaaagaaggacacgacgaaaaagaa
ttactcatgtccatggatgaagttctcggatcacccgatgccggaaagaccgtcgtgcaa
gtcaatgtagaatatgccattgactgcaaggctcctgaacgtcaggctctcattgagatg
attgttattctgttcaagaacggcaaacttagcaaatcggatgtgcaagttcccatgctt
gacatggtagagtttattgatagctttgtggtggatagtcctggagcctttggttacttg
ggtgaaatgcttagtgcctttttggatgtcaagactttggatattgcgtggctatgtgat
gctactagtaaggtgatgaataagtcagatcaggtgaaggtgattgatcatgcaatgaag
gtgatgactgctaattatggagagggtgctactcgtgcttgttttgggggaccgggtgag
agtgtggcattgagtcagttgcttggacaggctgagtttgagaaattggtttccgagtat
ctttaa
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