Thalassiosira pseudonana: THAPSDRAFT_264387
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Entry
THAPSDRAFT_264387 CDS
T01078
Name
(RefSeq) hypothetical protein
KO
K03327
MATE family, multidrug and toxin extrusion protein
Organism
tps
Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tps02000
]
THAPSDRAFT_264387
Transporters [BR:
tps02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
THAPSDRAFT_264387
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Gene cluster
GFIT
Motif
Pfam:
MatE
Motif
Other DBs
NCBI-GeneID:
7450021
NCBI-ProteinID:
XP_002296737
JGI:
264387
UniProt:
B8LCP8
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Position
16
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AA seq
433 aa
AA seq
DB search
RSLLKFYFPCLALWISGPLLSLVDTTVGAAGSAAQLAALGPATTFIDGSLYLFAFLNVAT
TNLYASALATAAKTSLYSGIGLMVFLLAVARPLIALYIGEWYIRLYCILSSPGLLDAAHS
YVKIRALSMPTSLLGGVLQAALLGAKDSVTPLVSILYSTIVNVCGDYLLVNRFHMGLKGA
AIATLCAQLAGTVAMIGPARRELLSKGSSLGLLPRWITKRAPDEINAKTFLKFAAPVLTL
ILGKISAFGFMTNAAAGLPGQPATLAAHQIALSLFFFASPFLEVISQLSQAYLPSYGAES
NRLVFRLEKVGILVGALMAGVVGGIIAFLPGIVTKDATVQTAVKPLAATLAAGVALTAPV
AVSEGTLIARKELSYLAGVYFVSTALLPPVLRRIRSGGGPVSQVWVCFALFQLFRSACFL
GRILTTSGTKDKE
NT seq
1300 nt
NT seq
+upstream
nt +downstream
nt
cgctcccttctcaaattctacttcccctgcctcgccctttggatctccggtcccctcctc
tctctcgtggataccacggtgggtgctgccgggtcggcggcacaattggctgctttggga
ccggctactacctttattgatggatcgttgtacttattcgctttcctcaacgttgccaca
actaatttgtatgcttctgcgttggcgactgcggcgaagactagtttgtattcgggaatt
gggttgatggtgttcttgttggctgtggcgagaccgttgattgcgttgtatatcggtgag
tggtacattcgtttgtattgcatcctgtcctcaccgggtctcctagacgcagcacactcc
tacgtcaaaatccgtgccctctccatgccaacctctctcctcgggggagtactccaagcg
gctctcctcggtgccaaagactctgtcactccactagtatccattctatacagtacaata
gtcaatgtttgtggggattacttgttggtcaatcggtttcatatgggattgaagggagcg
gcgattgcgaccctttgtgctcagctggctggaacggttgcaatgattgggccagcgaga
agagagttactgtcaaagggatcttcgcttggattacttcctcgttggattacgaaacgg
gcacctgatgagattaatgcgaagacgtttctcaagtttgctgctccagtattgacactg
atattgggaaagatcagtgcgtttggattcatgacgaatgctgcggctggattacctggt
cagccggcgacgttggcggctcatcagattgcattgtcgttgtttttctttgcgagtcca
ttcttggaagtgatttcacaattgtcgcaggcgtatttgccttcatatggagctgaatct
aacagattggtgtttcgcttggagaaggtcggtatattagttggagcgttgatggctggg
gtagttggaggtatcattgccttcttgccgggaattgtgaccaaagatgcaacagtacaa
actgcagtcaagccactcgctgcaacacttgcagcaggcgtcgccttaacagctccagtg
gcagtctctgaaggaacactcattgctcgtaaggagctatcttatcttgccggagtgtac
ttcgttagtactgcattgttgccacccgtcttgagaaggatacgaagtggtggtgggcca
gtgtctcaggtttgggtttgcttcgcgttgtttcagttgtttagatcggcttgcttcttg
ggaaggattttgacgacgagtggtacgaaagataaagagg
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