Thalassiosira pseudonana: THAPSDRAFT_264646
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Entry
THAPSDRAFT_264646 CDS
T01078
Name
(RefSeq) hypothetical protein
KO
K01179
endoglucanase [EC:
3.2.1.4
]
Organism
tps
Thalassiosira pseudonana
Pathway
tps00500
Starch and sucrose metabolism
tps01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
THAPSDRAFT_264646
Enzymes [BR:
tps01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.4 cellulase
THAPSDRAFT_264646
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_9
CelD_N
Motif
Other DBs
NCBI-GeneID:
7444393
NCBI-ProteinID:
XP_002297206
JGI:
264646
UniProt:
B8LDS2
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Position
19
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AA seq
602 aa
AA seq
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RVNQVGYLKFATKIGVVVDSSTSPIDWQIQDASGSVLLSGYTSVYGEDPASGDHLHHADF
SSLKDIGSYKLVVDGIGSSLSFRVAPSLYPSLPHESMNYFYFHRMGEEILGKHLVDDRYA
RAALHPGDTSVPPYTGWCESCENFDLFGSWADAGDFGIYTVNHAISAWTLLNLHELFPEA
FADGDLNIPESGNTFPDILDEVDFGSRFVRGMLPSNGGLASHKAHNHVWSDFTTTVNGEN
SQQSSRSAMGSSTPATYAVARVNAQLARIWDSKGGASEYVAELWNAAVDAWDRADGTSKT
YNANEASPGPAIGGGDYPDGEVNDDRYAAAVEMYLSAFAFGDQSTQAYKDAMMASSYFKA
VGQWDWASVNAAGTLSLYAVDNDLSSSVRLLDIEANIVSFADEIRTALDGEGYPTNLQFT
GQYPWGSNSFVVNRAIALAYAYEITGNTSYQDYILRTMDYIMGVNAMDLSYVTGYGEKAE
TDTHDRWAWTVGQASFWPKGWLSGGPNNGLINDYETPGGVAAAKSYAGPNTAPHAWGSKE
NTVNWNAPLAWVAWYCENKIVPNFGGCEGNCNPVASSLIGVKVLMNTPFFLELSGECYMM
YA
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
cgtgtcaaccaggttggatacctcaagtttgcgacaaagattggtgtcgtcgttgactct
tccacctctcctatagactggcagattcaagatgcttctggctccgttctattgagcggt
tatacaagtgtctacggagaagatcctgcgtccggagatcatcttcaccatgcagatttt
tcgtcattgaaagatatcggctcatataagctcgttgtcgatggcattggtagcagttta
tctttccgcgttgctccaagtttgtatccttcattgcctcacgagagcatgaactacttc
tacttccaccgaatgggtgaggagatcctaggaaagcacttggttgacgacagatatgca
agggcagcccttcatccaggcgatacatcggttcctccttacaccggatggtgcgagtct
tgcgagaattttgatctgtttggttcatgggcagatgcaggagacttcgggatatatact
gtaaaccacgccatttctgcttggacgctgcttaatcttcacgaactatttccagaggcc
ttcgccgacggtgatctaaacattccagagagtggcaataccttccctgatatccttgac
gaggttgacttcggatctcgtttcgtgagaggaatgttacccagcaatggaggtctcgca
agtcacaaagctcacaatcatgtctggtctgacttcaccaccacagtcaacggcgagaat
agtcaacaaagctctcggtcggccatgggatcgtcgactcctgcaacatatgccgtcgcg
agagtgaatgctcagctagcaagaatttgggattctaaaggaggtgcttctgagtacgtc
gctgagttgtggaatgctgccgtggatgcatgggatagagctgacggaacaagcaaaaca
tacaatgcaaatgaagcttctccaggacctgctattggaggtggagactatcccgacgga
gaagtcaacgatgataggtatgcagctgctgttgagatgtatctatcggcgtttgcattc
ggagatcaaagtacacaggcgtataaagatgcaatgatggcttcttcttacttcaaagct
gttgggcaatgggactgggcgagtgtaaatgctgcaggaactctgtctctctatgctgtt
gacaatgacctctcgtcttcggtacgtttgttagatatcgaagcaaacattgtatcgttc
gcagacgaaatcaggactgctttagacggtgaaggctatccaaccaacttgcaatttact
ggtcagtacccatggggaagcaactctttcgtagtaaacagagctattgctttggcgtat
gcctatgagattacaggcaacacctcttatcaggattacattctgaggactatggactat
atcatgggtgtgaatgcgatggatctctcttatgtcacggggtacggagaaaaggctgaa
accgatactcacgaccgttgggcatggacagtaggccaagcctcgttctggccgaaggga
tggctctctggcggtcctaacaacgggctcataaatgattacgagactccgggaggcgta
gcagcagccaaatcttacgctggtccaaacactgcacctcacgcatgggggagcaaagag
aatacagtgaattggaatgctcctctagcatgggtggcgtggtactgcgaaaacaaaatc
gtaccgaactttggtggctgtgaaggaaactgcaatcccgttgcctcttcattgatagga
gtcaaagtcctcatgaatactcctttcttcttggaattgtctggtgagtgctatatgatg
tatgcataa
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