Thalassiosira pseudonana: THAPSDRAFT_264740
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Entry
THAPSDRAFT_264740 CDS
T01078
Name
(RefSeq) ABC transporter
Organism
tps
Thalassiosira pseudonana
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_25
RsgA_GTPase
AAA_29
AAA_13
AAA_23
nSTAND3
DUF87
AAA_15
Motif
Other DBs
NCBI-GeneID:
7447779
NCBI-ProteinID:
XP_002294649
JGI:
264740
UniProt:
B8CF31
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Position
20:690908..692262
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AA seq
389 aa
AA seq
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SSPSLNDCIGLLVSLIAIYVLLAAYVSAVLPMGNGNALKLYFFLQPSFWCGFCSSGGNSD
KGAKSDVEEGNTTKGRGVEALGVGKSYGKVRALKPLSLSMNVGEVTALLGHNGAGKSTFA
NILCCEQSASEGDVFVFGQSVSRNQNNVRRMIGECKQDDFLWPYLTAREHLELFVGIRGL
ENDTDSVASTVQKWLESVDLDIVKDNFASSFSGGMKRRLSLANSTIGNAPVVVLDEPTTG
MDPLSRRFVWNHITSIKSERVILLTTHAMEEADLLSDTVVILCSGSLVANGTPLELKSKH
GSAIQFSLIVEKESVDRVDRLVNDHFDGSLSWIKVESSTSGYVRVNIKKVSRVDASLLSD
FIGWLEGEDSPVTEFSISNSSLEEVFLAV
NT seq
1168 nt
NT seq
+upstream
nt +downstream
nt
agcagtccttccctaaatgattgcattggccttttggtatcgctgattgccatctacgtc
cttctcgctgcctacgttagtgccgtcttgccgatgggaaatggaaatgcattaaagctt
tacttctttcttcagccaagcttttggtgtggattctgcagcagtggaggaaatagtgat
aaaggtgctaaatctgatgttgaggaggggaatacgacgaaagggcggggtgtcgaggcg
ttaggtgtggggaaatcgtatggaaaagtcagagctctcaagcctctttcgttgtcgatg
aatgtgggagaagtgacggcattgttaggacacaacggtgccggaaagagcacgttcgcc
aacattctctgctgtgagcagtctgcttcagagggtgatgtatttgtctttggacagtca
gttagtcgcaatcaaaacaatgttcggagaatgattggtgaatgcaaacaagacgacttc
ctttggccttatctcacggcaagagagcatttagagttgttcgtaggcatacgtggattg
gagaatgacacagattccgttgcatcaacagtgcaaaaatggctcgaaagtgttgatttg
gacatcgtcaaagacaattttgcttcatcattcagtggcggcatgaagcgtcgtctgtca
ttggccaactcgacaattggaaacgcccctgtggtagtactcgacgaaccaacaactgga
atggatccattatcgcgacgctttgtgtggaatcatattacttcaatcaagtccgaacgt
gtcatcctattgacaacacacgctatggaagaggctgatcttttgtctgatacagtcgtg
attctttgttcagggagccttgtagcgaatggaacgcctcttgaactcaagtcaaaacac
ggcagtgcaattcaattctcacttattgtggaaaaggaaagtgtcgatagggttgatagg
ttggtcaatgatcactttgatggctcgctatcatggatcaaagttgaatcgagcacttcg
ggatatgttagggtcaacatcaagaaggtcagtcgggttgatgcgtcgttgctatcagat
tttatcggctggcttgaaggtgaagattcgccagttacagagttcagtatttccaattca
tctttggaggaagtgttcttagccgtga
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