Thalassiosira pseudonana: THAPSDRAFT_264903
Help
Entry
THAPSDRAFT_264903 CDS
T01078
Symbol
CHT1_1
Name
(RefSeq) chitinase
KO
K01183
chitinase [EC:
3.2.1.14
]
Organism
tps
Thalassiosira pseudonana
Pathway
tps00520
Amino sugar and nucleotide sugar metabolism
tps01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
THAPSDRAFT_264903 (CHT1_1)
Enzymes [BR:
tps01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.14 chitinase
THAPSDRAFT_264903 (CHT1_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_18
TIM-barrel_EndoS
Motif
Other DBs
NCBI-GeneID:
7442654
NCBI-ProteinID:
XP_002295158
JGI:
264903
UniProt:
B8CGB2
LinkDB
All DBs
Position
23:248895..250000
Genome browser
AA seq
333 aa
AA seq
DB search
YYQSWAIYRNGNCNPIQPNQIDVTLFGYTHLAFSFAGISYSGYMEPYNGDTGFYSMYSTF
NSMKATYPTLKTLIAVGGWTFDQSRFVYVSSTEARRTAFASSVVTFLETHGFDGIDLDWE
YPVTRQGTAADYANYPLLCQALREAFDNAGHTDWLITIATSINSDKLALGYDLMGMAPYV
DWFNMMSYDIYGSWDSTAGANADVPFITNTMDYVFGLGVPREKLVLGLAAYGRSVRLSST
SCTTDGCAINGAGLSGCHGEAGNLPYFQIDETYLQTGNYDSLTLNPTSLSMELVTGGNQY
WTSFDNAETINIKHNYANSECMRGVMWWAVDLM
NT seq
1000 nt
NT seq
+upstream
nt +downstream
nt
tactatcaatcatgggcaatctacagaaatgggaactgtaaccccattcagcccaatcag
attgacgtaactttgtttggatacacccatctagcgttcagctttgcaggtattagttat
tctggatacatggagccatacaacggcgacaccgggttctacagtatgtactctacgttc
aactcgatgaaggcgacgtatccaacgttgaaaacactgattgccgtggggggatggacg
tttgatcagtcgaggtttgtttatgttagtagtactgaagcgaggaggactgcctttgct
agttcggtggttacgtttttggagactcatgggtttgatggtatcgaccttgactgggaa
tatccagtaacgagacagggtactgctgctgattacgccaactatccattgctatgccaa
gcactacgagaggcatttgacaacgcaggtcatacagattggctcattacaatcgccact
tccatcaactccgacaagttggcactggggtatgatttgatgggaatggctccatacgta
gactggttcaacatgatgtcgtatgatatatatggctcgtgggattccactgcgggtgcc
aacgccgatgtgcccttcattacgaacacgatggattatgtgtttggattaggagtgcca
agagaaaagctcgtgcttggtctagctgcctatggacgaagtgtgagactatcgagtact
tcttgtaccaccgatggatgtgctatcaacggtgctggactgtcaggatgtcatggcgaa
gcaggcaacctgccatactttcagattgacgaaacgtacctccaaacaggaaactatgac
tcattgactctcaacccaacgtctctctcaatggagcttgtaaccggaggaaatcaatat
tggacttcgttcgataacgcagagaccatcaacatcaaacacaattatgcgaatagcgaa
tgtatgagaggagtaatgtggtgggcagtcgatcttatga
DBGET
integrated database retrieval system
