Thalassiosira pseudonana: THAPSDRAFT_2653
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Entry
THAPSDRAFT_2653 CDS
T01078
Name
(RefSeq) predicted protein
KO
K16743
abnormal spindle-like microcephaly-associated protein
Organism
tps
Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tps03036
]
THAPSDRAFT_2653
Chromosome and associated proteins [BR:
tps03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
THAPSDRAFT_2653
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IQ
CH
CAMSAP_CH
IQ_SCN5A_C
Motif
Other DBs
NCBI-GeneID:
7446665
NCBI-ProteinID:
XP_002287403
JGI:
2653
UniProt:
B8BUZ6
LinkDB
All DBs
Position
2:1514597..1520968
Genome browser
AA seq
1950 aa
AA seq
DB search
MSGIMMNSSSRVHQHSTNTPRPSSAPTPTTSTGRKPLSSFNSNVVVARSNALRPHQPKWQ
RQSSSKSHNKMKPLGASNRSFSTNDLMQQQQQHGSAIKSATKKQQQQPMGSFVYSTPKIK
TSSVRRTSSTANNTKQQQRRSLGSAALSNRRLNLDPLGEAIYCDTNVVGVGYRGRRSNNA
VVEEEGRPSNNLTDFIAGRRAKLAQIGGDLRCNSNNVMVDTSEESGGALMAEYKRQASHW
RRYSSFKSYYHARPVGDATVVLGMMQQSEPKEIAIQPQQQTTTARSSSLTPTDAHWEAKQ
SVAFSNWLNHLFLPTDAQVNHLSDDSNANALLTLLTHQQRSAESKAATVLFTSFEMMETR
DSIEREVGRGRLVLRSDRDILADVQLREGLTELLLSYSSRWLQLGLETVLGLYDGEGRKM
SERLPKKFLKRVIEEMILSEPSTVMKYTGGRCKTPCGKFEKRLRARLQQHALTKMLTLVA
FLDLAKERHLLADDPCLFEKSATVKSSLQVLVSICQNCFARDECIAKHSYLGISVSHVQN
PLDEYEFFIENLAVDLKDGVRLAKMVEILTMTKNVLTEMRLPAVSRDHKIHNVGIVLSAL
HNAGVGNISDVTAAHIVDAHQPRILQLLWSIIVEFQIAAVLDASAICKEIDRLSQLKTRE
NNNGKDSLGLEQLDLTGGTYERIKRLLLVWCQVVCSFHGVSVENFSTSFADGKVLCLLIS
FYLPSILPLQAIRPTVSDLQITTKTGVKIAGYVHKKGNLALAMARMSEVGGIPPLFSASD
FLLPPEEKAIILCLSFLFSRLTVTQQEFVATSFQRRVVASLAFRFTVTLHRASILIQCHV
RRHLASKAVSGMRAKMACLLIQTSWRSSQTSSAYQFVRKGVVSFQSLWRKHVARSSYRST
LTQFVKLQTQWRTHSCLNQYISIRNNVIIVQSAVRRCLVISRLRKIVDASFRERIMFRRY
LRWRKKSGTRSKLESLFHLVESRGAMNLSCVNSNAAVHIQAVYRGLIGRTKMKRMIHAST
QIQRFWRGCQAKISFGFDLMSVIVTQSIVRRFVIRRQIERRHRASTDLQKVWRGYNAKVS
YGFDLMAVVIVQSVARAFIARRSVDQLRKASVSIQRVWRGHQAKVLYGFVLMDVVVTQSF
ARRFITRRRAEERICASSRIQSVLRGYRKKNEYVTDALDIATAQSIARTFICRKQGDSLC
DAAIVIQRVWRGRTSRHKHEAFRLGVITVQSHARCFFARRKSSNMAMAKSHNNAAIGIQR
VWRGHKAKHLHRSVFVALVTMQSRARMLTAKRDRDIKLQSTRKHHAATIIQRCWISKTFR
SKYLQMQQLVRICQAYARRNLAASSFRRQKNCAVVMQRHWRGFCARVQVSISLGAASVIQ
ACIRRDLASTHVSELKERAQSVVKTQSLWKASKTKQLIAMHKAPAVSIQTFARQASATKA
AANQHYLAILIQSSWRRFVAKRQFMKSLRDVVVVQGLERCHHQQVAAVAIQSGFRHWLRR
RQAQHAINIQRNWKGFSVRQEYRRKLQCHARRCIAGRTLSRIKSETSVAEPTPYYDHSLL
SDQEVVSFVSRHAPRRHHVCDEVALRESPNTSRQNSPTLLYEESAVIIQKAWRCYTASIA
LSIIKIAADIIQNTSRRYLVKLKMRRLNDSATTIQRFSRGICTRMHNREETIAATEIQRV
WRGYSVNVEFMLTVLSAIRIQSCARRFLEAKSKVDGSYRREEPGTTASLLTNGSDEMSLY
VVDSSFDGQIELQPDGICSPRFHIDHGVQGVQTRKQLRRSSALQSAQKSNTTQLQPLYPE
HSAQRITTRSTTMTLNLAQSAEALRVLKTSRLLSEVTAAVSTLEITTMQSVDCCKYFTEA
NAHYSFFYLIGSCNRSSPHLELLMSILQTLTNVASHPSTVPPLATVEAVDILTDLVQMFR
DKSRLFALSSSLLERLILSDNTLLVSELFC
NT seq
5853 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcatcatgatgaactcgtcctcccgagtgcaccaacactctaccaatactcct
cgaccgtcctcggcacccaccccaacaacatcaaccggtcgaaagccactatcatcgttc
aattccaatgttgtagtggcgaggagtaatgctttgcgtccacatcagcccaagtggcag
cgacagagcagcagcaaatcacacaacaagatgaagccacttggtgcatccaatcgatca
ttctccaccaacgatctaatgcaacaacaacaacaacatgggtcggcaataaagtcagcc
acaaagaaacagcaacaacagccaatgggatcctttgtttattccactccaaaaatcaaa
accagtagtgtacgaagaactagcagcactgcgaacaacaccaaacaacaacaacgacgg
tcgttgggtagtgcggcattgtccaacaggcgactcaatttagatccattgggtgaggca
atttactgcgataccaatgtggtgggagttggatatcgtgggagaagaagtaataatgcg
gtggtagaagaagagggtagaccgagcaataatttgactgactttattgctggtagacgt
gccaaacttgctcagatcggtggtgatttgcggtgcaattcaaacaatgtaatggtggat
acgagtgaagagagtggaggtgctttaatggcagagtacaaacgacaagcttcgcattgg
aggaggtattcgtcattcaaatcatactatcatgctagacctgtgggtgatgctactgtc
gttttgggaatgatgcagcaatctgaacccaaagagattgcgattcaaccacaacagcaa
acaacaacagcacgatcatcatcattgacaccaaccgacgctcactgggaggcaaaacaa
agtgtcgccttctccaactggctcaaccacctcttcctccccacggacgctcaagtgaat
catctttccgatgactccaacgctaacgccctcttaacccttctcacacaccaacaacga
tcggcagagtcgaaagcagccaccgtattattcacctcgttcgaaatgatggagacgcgt
gactcaattgagcgcgaagtgggtagaggacgattggtattgaggtcggatagggatatt
cttgcggatgttcaacttcgtgagggattgactgagttattgttatcgtatagttcgcgg
tggcttcagttggggttggagacggtgcttggtttgtatgatggagagggacgtaagatg
tctgagcgactgccaaagaaatttctcaagagagttattgaggagatgatactctccgaa
ccttccacagtaatgaagtacacgggcggcagatgcaaaacgccctgtggaaagtttgag
aaaaggcttcgcgcaaggcttcagcaacatgctctcacaaagatgctcacgttagtagcc
ttccttgacttggcgaaggaaaggcatcttcttgccgatgatccatgcctctttgaaaaa
tcggcaacggtcaagtcatcacttcaagtgctcgtttcgatctgtcagaattgttttgct
cgcgatgaatgcatagccaaacactcgtacctcggcatttccgtgtctcacgtccaaaat
cctcttgatgagtacgagttctttattgagaatctagcagtggacctcaaagacggagtg
aggctagcaaaaatggtagaaatactaacaatgacgaagaatgtcctcactgagatgcgt
ctccctgcagtatcacgagatcataagattcacaacgttggaatagttctatcggccttg
cacaatgctggtgttggaaacatctctgacgtgacggctgctcatattgtagatgcacat
cagccgaggatccttcaactgttgtggtctataattgtggagtttcagatagctgcagtg
ttggatgcttctgctatttgtaaggagattgataggctttcgcagctaaagacgagggag
aacaacaacggtaaagattcgttgggattggaacagcttgatttgaccggaggcacgtac
gaaagaatcaaaagattacttttggtgtggtgtcaagttgtctgctccttccacggcgtt
tcagttgagaacttctccacgtcctttgccgatggaaaggttctgtgcctactgatcagt
ttctatcttccatctatactgccactgcaagccattcgtccaacagtgtctgatttgcaa
ataacgacgaagacgggcgtgaagattgcaggatacgttcataaaaagggcaatctagca
ctggccatggctcggatgtcggaagttggcggcattcctccactgttttcagcgagcgat
ttccttcttcctccagaggaaaaggcaatcatcctttgcttgtcgttcctcttttcaagg
ctcaccgttacacagcaagaatttgttgcaacgagcttccaacgacgagtagttgcatca
ttagcgtttaggttcaccgttacacttcaccgtgcttcaatccttattcagtgccacgta
aggagacatttggcttcgaaagctgtctccggaatgagagcaaaaatggcctgcttatta
atccaaacgtcgtggcgatcttctcaaacgtcgtctgcctaccagtttgtacgtaaagga
gtggtatctttccagtcgctgtggcggaagcatgtcgcgaggagcagctaccgttcaact
ttgactcaattcgtcaaactccagacacaatggagaactcattcttgtctgaatcagtac
atctccatacgcaacaatgtcattattgtacaaagtgctgttaggagatgtttggtaatt
tctcggctgcgcaagattgttgatgcgagctttagagagaggatcatgtttcgtcgatac
cttcgttggcgtaaaaagagtggcacacgaagcaaactagagtctctctttcacttggtt
gaatcacgtggtgcaatgaatttaagctgtgtcaattcgaacgcagccgtacacatccaa
gctgtttaccgaggtctcatcggccgaaccaaaatgaaacgaatgatacatgcatcaaca
caaatacagagattctggcgaggatgtcaagccaagatctcttttgggtttgatttgatg
agtgtcatagtaactcaaagcattgtgcgacgattcgtcattcgtaggcagattgaaagg
cgacaccgggcatcgactgacctccaaaaagtttggcgaggatacaatgccaaggtatcg
tacggattcgatttgatggccgttgttatagtccaaagtgttgccagagccttcattgca
cgtcgaagtgtcgaccaactacgcaaggcttccgtatcaattcaaagagtgtggcgagga
catcaagccaaagtattatacggctttgttttgatggacgttgttgttactcaaagtttt
gcaagacgtttcatcactcgtcggcgagccgaggaacgcatctgcgcatcatctcggatt
cagagtgttttgagagggtaccgtaaaaagaatgagtacgtcaccgacgctttggatatc
gccactgcccaaagcatcgcaagaacgttcatttgtcgcaagcaaggcgatagtctgtgc
gacgcagcaattgtaattcagagagtatggcgaggacgcacatcacgtcataagcatgag
gcgtttcgacttggtgttattactgtgcagagtcatgcgagatgtttctttgctcggaga
aagtcttccaacatggcgatggcgaaaagtcataacaacgctgcgattggtattcagagg
gtatggagagggcacaaagcaaaacatctgcatcgctctgtatttgttgctctcgtgaca
atgcaatccagagcgcggatgttgaccgcaaagagagaccgagacatcaaacttcagtcc
actcgtaagcaccatgctgcaaccataattcagcgttgttggatctccaagacttttcgc
tcaaaataccttcagatgcaacagctagttcgcatttgccaggcatacgcacgaagaaat
ctagcagcgtcatcctttcgccgccagaagaattgtgcagtcgtaatgcagagacattgg
agaggcttttgcgcgagagtacaggtctccatttcactaggtgctgcctctgtcattcaa
gcatgcatccgacgggatcttgcatccacccacgtctctgagttgaaggagcgagcgcaa
tctgttgtgaagacccaatccttgtggaaagcttccaaaaccaaacaacttattgcaatg
cacaaggcacctgcagtatcaatccagacgtttgctcgtcaagcctcggcaacgaaggct
gccgcaaatcaacattatcttgctatccttattcagtcatcttggcggaggttcgttgcc
aaacgacaattcatgaagtctcttcgagatgttgttgttgttcagggccttgaacgctgt
catcaccaacaagtcgccgcggtagcaatccagtccggctttcgccattggttacgtcgt
cgtcaagctcagcacgctatcaatatccaacgtaactggaaagggttctctgttcgacaa
gagtatcgtcgaaagttgcagtgccatgctcgccgatgcattgccggacgaacattatcg
aggatcaaatcagaaacttccgtggccgagccaactccttactacgatcactccttgctc
tctgaccaagaagttgtgtcatttgtttctcgtcacgcccctcgaagacaccatgtatgc
gacgaggttgctctccgtgagtcacctaatacatcacgacagaactcgcctacactactg
tacgaagagagtgcagtcatcatccaaaaggcttggcgttgctatactgcatcaatcgca
ctttctatcatcaaaattgcagctgatatcatacagaatacaagtcgtcgttacttggtg
aaattgaagatgcgtaggttgaatgattccgcaacaacgattcaacgattttctcgggga
atatgtactcgtatgcacaatagggaagagacaattgcagcgactgaaattcaacgtgtg
tggcgtggctatagtgtgaatgtggagtttatgctgactgttttatcggctatcagaatc
caatcttgtgctcgtcgcttccttgaggcaaagtctaaggttgacggtagctacaggcga
gaagagccagggacaacagcgagcctcttgaccaacggcagcgatgaaatgtcgctttat
gttgtcgattcgtctttcgatggtcaaattgagttacagccagacggaatctgctcgcca
cgttttcatatcgaccatggcgtccaaggagtgcaaacgaggaaacaacttaggcgatct
tcggctttacaaagtgctcagaaaagcaacaccacgcaactgcaaccgctttatcctgaa
cacagtgctcaaaggatcacaacgagatcaacaacgatgactttgaatcttgctcagagt
gcagaagcgcttcgagtcttgaagaccagccgtcttctctctgaagtgacggctgcagtt
tcgacattggaaattacaacaatgcaatctgttgactgttgcaagtacttcaccgaagca
aatgcacattacagtttcttttatcttattggcagttgcaaccgcagctcacctcattta
gagttgctaatgagtatcctccaaaccctaacgaacgttgcgagccatccctctactgta
ccaccattggcaaccgtcgaagcagtggatattctaacagacttggttcaaatgtttcgc
gacaagagtaggctgttcgcattgtcatcctctctgttggagcgactcattctcagcgat
aacacgctactcgtgagtgaactgttttgttga
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integrated database retrieval system