Thalassiosira pseudonana: THAPSDRAFT_26553
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Entry
THAPSDRAFT_26553 CDS
T01078
Name
(RefSeq) ABC transporter
Organism
tps
Thalassiosira pseudonana
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_5
AAA_16
AAA_21
ABC_ATPase
AAA_25
RsgA_GTPase
AAA_29
Rad17
AAA
AAA_15
AAA_28
AAA_30
AAA_14
NB-ARC
KAP_NTPase
Motif
Other DBs
NCBI-GeneID:
7449754
NCBI-ProteinID:
XP_002286040
JGI:
26553
UniProt:
B8BPW6
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Position
1:576226..578424
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AA seq
534 aa
AA seq
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MLFLLGTIDSILDFWCIFLFGYAKENIVKGVRIDTFASIVRQEQAFFDQSNTGDLISRLT
SDCGEMAGDLTWFFRFSVEAAVRITGISTYMILRSPFLGLCTVGIVPVVGVINKLYGDWL
AKNAQAVQNSLAEATTSAHESLACIQTVITSASEEHECEKYTKKVNTMYALNIRQMIATG
IYFMVVSTFLINTCVQAALLLLGSHFVQQGKLTPEVLLAFMLYQGQLQEYTLNLFQSYSS
LIKSSGAGDRVFYLLDRHPPAPGTGNESVKSLELATDEVTTDGDITLQDVTFAYPTRPET
LALNRCSLEIKSGSIVALVGHSGCGKSTIISLLERLYDPDQGSIVFGEVNLRVMNLKAHR
EKIGLVTQDPVLFSGSIRENIGYGASATFDEIVEAAKVANAHSFINSFPNTYDEDVGERG
MNLSGGQRQRLVIARALIRKPSLLLLDEATSALDPESEAAVQEALNELLQHRAGMTTIII
AHRLQTVRNADTIVVIKKGAVVEQGSHAELVRNDQGPYRRMVDRADSMGILPET
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgttattcttgctcgggactatcgacagtatacttgacttttggtgtatcttcttgttt
ggatatgcaaaggaaaacatcgttaagggtgtgaggatcgatacatttgcatcgatagtg
agacaagaacaagcattctttgatcagtcaaacacaggtgacttgatatctaggttgaca
tcggattgtggcgagatggctggtgacctgacgtggttcttccggttcagtgttgaggca
gcagtcagaattactggtatctccacgtacatgattcttcgcagtccgtttctcggtttg
tgtactgttggcattgttccagttgtcggcgtgataaacaaactatacggggactggttg
gcgaagaacgctcaagcggtacagaactctctcgccgaagcaacaacaagtgcacatgaa
tcattagcttgcatacagactgttatcacttcagcctcagaagagcacgagtgcgagaaa
tacacaaagaaggtcaacacaatgtacgctctcaatatacgccagatgattgcaactgga
atctacttcatggtggttagtacgttcctgatcaatacgtgtgttcaagcagcacttctt
cttctcggatcgcatttcgttcaacaaggaaagcttacaccggaagtactattggcattc
atgctctaccaaggccagcttcaggaatatacgttgaatttattccaatcatattcatct
ctaataaagagctcaggagcaggagacagagtgttttatcttctagaccgacacccgcca
gctcccggcacaggaaacgaatcggtcaagagtttagaattggcaacagacgaagtaaca
accgatggcgacattacacttcaagacgttacatttgcttatcctacgcggccggaaacg
ctggctctgaaccgttgctctcttgagattaagagcggaagtatagttgctttggttggt
cattcgggttgtggaaaatcaacaataatatcactgttggagagactctatgatccagac
caaggaagtattgttttcggcgaagtcaatctaagggttatgaatctaaaagctcataga
gagaagatcggtttagtaacacaagatcctgtgttgttttctggatcaatacgtgagaat
attggctatggcgcatcggcaacctttgatgaaatagtagaagctgccaaagtagcaaat
gcgcacagcttcattaactcatttccaaacacgtacgacgaggatgttggagagcgtgga
atgaatctgagtggaggccagaggcaacgtcttgtgatagcacgtgccttgataagaaag
ccgtcattgttgttactagatgaagcgacgtcagcgcttgatccagaatctgaggcagca
gtgcaggaagcgttgaatgaactcctccagcatagagcaggaatgacaaccatcataatt
gctcatcgactgcagacggttcgcaatgctgatacgatagttgttataaaaaaaggagcc
gttgttgagcagggcagtcatgctgagttggtaagaaatgatcaagggccttatagaaga
atggtggatagagctgactcgatgggaattcttccagaaacttga
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