Thalassiosira pseudonana: THAPSDRAFT_26686
Help
Entry
THAPSDRAFT_26686 CDS
T01078
Name
(RefSeq) predicted protein
KO
K03246
translation initiation factor 3 subunit I
Organism
tps
Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
tps03012
]
THAPSDRAFT_26686
Translation factors [BR:
tps03012
]
Eukaryotic type
Initiation factors
eIF-3
THAPSDRAFT_26686
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EIF3I
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_EML
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_1st
WD40_RFWD3
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_Vps41
WDR90_beta-prop_4th
Beta-prop_NWD2_C
PEP5_VPS11_N
Beta-prop_WDR75_2nd
Motif
Other DBs
NCBI-GeneID:
7451479
NCBI-ProteinID:
XP_002286220
JGI:
26686
UniProt:
B8BQX0
LinkDB
All DBs
Position
1:1470148..1471462
Genome browser
AA seq
330 aa
AA seq
DB search
MRPILLKGHERSITVVKFNHDGDLLFTGSKDHVPSVWRSENGERLGTFNGHKGTIWDLDV
CRFSKRVVTASADAMAKLWDCETGECLKTFVHHGPVRGAAFADGSNMFATISDPFVEHNA
QISVYDIPENDDPSTYSDTPRLEIELPKNSDGKRVNATNIVWLNLNEALFVTFDNGSIRL
YDPVTGEELDEFFPHEKKINRVSFNLDKTLFITSSADFTAKLYDVVDLRHLKTYKTDRPV
NDAVISETKDHILLGGGQEAMSVTTTSGKVGKFETRFFHLVYEEEFGTVKGHFGPINAIA
INPNGRCYASGAEDGYIRLHYFDKSYLDMK
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgagaccaattctactcaaaggacacgagcgttccatcaccgtcgtcaaattcaaccac
gatggagacctccttttcaccggatccaaagatcacgttccctccgtatggcgatctgaa
aacggggagcgtctgggaaccttcaatggacacaagggtaccatttgggacttggacgtg
tgccgtttctccaaacgagttgttacggcaagtgccgatgccatggccaaactatgggat
tgtgaaaccggggaatgcctaaagacatttgtgcatcatggtcctgtgcgtggggctgct
tttgccgatggatccaacatgttcgccaccatttccgatccttttgttgaacacaacgcc
caaatatctgtgtatgacattcccgaaaacgacgacccgtccacctattcggatactccc
cgattggagattgaattgcccaagaactcagacgggaaacgtgtcaatgctacgaatatc
gtgtggttgaatctcaatgaagcgttgtttgttacctttgacaatgggtcaattaggttg
tacgaccctgttactggggaggagttggacgagttcttcccccacgagaaaaagatcaat
agggtgagcttcaacttggacaagactctctttatcacgagttcggcggatttcacggca
aagttgtatgatgtggtggatttacgtcatttgaagacatataagactgatcgtccagtg
aatgatgctgttatctcggagacgaaggatcatatcttgctggggggaggacaggaggcc
atgagtgtaacaacaacttcgggaaaggttggaaagttcgagacacgtttctttcacttg
gtatatgaagaggagtttggaactgtaaagggacatttcggaccgatcaatgccattgct
atcaatcctaatggacgttgttatgccagtggagctgaggatgggtacattcgtctccat
tacttcgacaagagttatttggatatgaag
DBGET
integrated database retrieval system