Thalassiosira pseudonana: THAPSDRAFT_268027
Help
Entry
THAPSDRAFT_268027 CDS
T01078
Name
(RefSeq) uncharacterized protein
KO
K15429
tRNA (guanine37-N1)-methyltransferase [EC:
2.1.1.228
]
Organism
tps
Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tps03016
]
THAPSDRAFT_268027
Enzymes [BR:
tps01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.228 tRNA (guanine37-N1)-methyltransferase
THAPSDRAFT_268027
Transfer RNA biogenesis [BR:
tps03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
THAPSDRAFT_268027
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRM5-TYW2_MTfase
TYW2_N_2
Motif
Other DBs
NCBI-GeneID:
7445125
NCBI-ProteinID:
XP_002286801
JGI:
268027
UniProt:
B8BQY5
LinkDB
All DBs
Position
1:complement(1510021..1511872)
Genome browser
AA seq
480 aa
AA seq
DB search
MTHHLAPLDSLPTSIYPPSAYPPPSFFESSSLIYPALLIPAKRTGEVQKTLKDVIFTEPK
RKSVYPLEEGVDYSSIEVSAEGGYDPMKERKVVLIRLGDIAGKNEEEQITGIKEDPVFQD
ARVKSMLLSAKINIGAEPSTAPNAATNVEEVPSSFEIAGHVAHVNLRSESLPYKYLIGKA
ILDKNPKLRVVVNKIGNIENEFRTFPMEILAGEGLDLDLLKEHGCRFKLDFAKVYWNSRL
QGEHARLVQYITKPKECIVADAMAGVGPFAVPLTSALAPHYYKTTVVCHANDLNPISYKY
LQTNAQLNRCFADRLITYNLDGREFIHKMNYERIEADHFIMNLPQMAPEFLDAFRGWKFD
DTTGHRPIIHVHCFDEKTRNEEETARMETHVLQRCEAALGSSGCLVDKRQENDVQIRVVR
DVGPRKNMLCVSFRLPVEVAGVEKLLLTKNSDAEVNGKRKRENYDCVAEVSNVSKKERDS
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgacacatcacctcgctccactcgacagcttaccgacctccatctatcctccatccgcc
tacccccctccttccttctttgagtcctcgtccctcatctaccctgctttgttgatcccc
gcaaaacgcacgggtgaagttcaaaagacattgaaggatgtgatctttactgagccgaag
cgtaagagtgtgtaccctttggaagagggggttgactattcgtcaatcgaggttagtgca
gaggggggatatgatccgatgaaggaacgaaaggtggtactgattcgtcttggtgatatc
gctggcaagaacgaggaggaacagattacaggaatcaaagaggatccagtgtttcaagat
gctagggtaaagtcgatgcttttgtctgcgaagattaacattggagctgagccgtccact
gcaccgaatgcggctactaacgtcgaagaagtaccctccagctttgagattgcaggacac
gtggcacacgtcaatctacgttccgaatcattaccctacaaatatcttatcggaaaagca
atcttggacaagaatccaaagcttcgtgtcgtagtgaacaagattggcaacattgaaaat
gaattcagaacattcccaatggagatattggctggggaaggattggatttggacttgctc
aaagaacacggatgtcgattcaagcttgattttgccaaagtatattggaactcaaggttg
caaggcgagcatgcaagattggttcagtatattacaaaaccaaaagagtgcattgtggcg
gatgcgatggctggtgtcggaccatttgcagtaccactcacttcagcgcttgcacctcac
tattacaaaacaacagtcgtttgtcatgccaatgatttgaatccaatcagctacaaatat
ctacaaaccaatgctcagttgaacagatgctttgcagatcggcttataacctacaacttg
gatggacgagagtttatacacaaaatgaactacgaaaggattgaagctgaccacttcatc
atgaatctaccgcaaatggcacccgaattcctagatgcctttcgtggatggaagtttgat
gatacgactggacatcgaccaattattcacgtgcattgttttgacgaaaagacacgcaat
gaggaggagacagctcgaatggagactcatgttctgcaaagatgcgaggcagcattagga
tcttcaggatgtttggttgacaaacgacaagagaacgatgttcagatacgagttgtcaga
gatgttgggcctaggaagaatatgctgtgtgtgagctttcgtttgccagtagaagtggca
ggagttgaaaagctattgctcacaaaaaattcggatgcggaagtaaacggaaagaggaag
agggaaaactatgattgcgttgccgaggtctcaaacgtgtcaaagaaggagagggactcg
tga
DBGET
integrated database retrieval system
